Transcript Information: R_Transcript_169199.p1


Annotated TAIR IDAT1G10710.1
Annotated Gene Namepoor Homologous synapsis 1
Annotated Gene Symbol(s)PHS1
Annotation TypeHomolog
Chromosome Positionchr1:3558423-3561495 | Forward length=410
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0586046189532
Replicate 21.9733365052912
Replicate 31.8945422072006
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 31.5012610287538
Condition 3: 24 Hour
Replicate 11.4672282814698
Replicate 22.5703497203304
Replicate 31.5634074776355


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169199.p1 GENE.R_Transcript_169199~~R_Transcript_169199.p1 ORF type:complete len:266 (+),score=33.79 R_Transcript_169199:67-864(+)
ATGAGTCACAGTCACGCCCCTCTCGCCCAAACCCTTTACCATGGAAGCAACAATCTCGGAACCCCCACCACAAAAACTACTTGGGTTGTCAAATACGCAAGATTCTTCACCTTCCCATCTACTTCTACTGCCACCACATCCACCACTTTACGACCCCTTTTCCCCAAAACGAAACGCCTTGTTAAGGGCACTTGGGTTTCCTCTTTTTCCACCAATGTTTCCCTTCACATCCTATTTGACCGCCATGAACCAACCCTTGTTGTGTCTCATCTCAAAAACGTCTATGAAGAACACTATATCTCCAATCTGCATTTCACATGGCCTCAGGTGTCCTGTCCTCCTGAATCTGCTGTTCAAGGAAGCAGTGTGATATTTGCTAGTTTCAGAGACAGTATGCACCAGTGCTTGAGGGACACATGGAAGGTCAACTGTTCAAGGGGCACAACATCCACTTCCAGGCATCAGAGGATTGATAAAGAATCAAATTGTATAAATCGTCTTGTGGAGAGTAATACTACTACTACCCTGTGGCAACCTACCATCCATCAGGAACGTATTCAGCACTCGTATTCTCAACACACAATGCTAAGGGATGGTGTGGAAAGCAGTGATGCTGGTTTGCCTCGTAGCTTTACTGCACTTGTTAATGAGAGTTGTACTGAGACTGATCCAGGAGTACCTCCCCAGCACCAATCTCTCAAGGGAAGCGTTGCTGACTATTCTTTCTTAGATATGCTGGACAAGATTGAGTATGTCATTTCTGCACTGGGAGGGGACTTTGCATTTTCAGGAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169199.p1 GENE.R_Transcript_169199~~R_Transcript_169199.p1 ORF type:complete len:266 (+),score=33.79 R_Transcript_169199:67-864(+)
MSHSHAPLAQTLYHGSNNLGTPTTKTTWVVKYARFFTFPSTSTATTSTTLRPLFPKTKRLVKGTWVSSFSTNVSLHILFDRHEPTLVVSHLKNVYEEHYISNLHFTWPQVSCPPESAVQGSSVIFASFRDSMHQCLRDTWKVNCSRGTTSTSRHQRIDKESNCINRLVESNTTTTLWQPTIHQERIQHSYSQHTMLRDGVESSDAGLPRSFTALVNESCTETDPGVPPQHQSLKGSVADYSFLDMLDKIEYVISALGGDFAFSGT*

Click here to download the sequence:
Link to NCBI Protein BLAST