Transcript Information: R_Transcript_169203.p1


Annotated TAIR IDAT1G10710.1
Annotated Gene Namepoor Homologous synapsis 1
Annotated Gene Symbol(s)PHS1
Annotation TypeHomolog
Chromosome Positionchr1:3558423-3561495 | Forward length=410
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9647284360982
Replicate 21.8225955222481
Replicate 31.5112083830795
Condition 2: 8 Hour
Replicate 12.2105294744041
Replicate 22.9503941318231
Replicate 30.69329068341756
Condition 3: 24 Hour
Replicate 11.1957191264429
Replicate 21.9910997609549
Replicate 31.8239753905748


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169203.p1 GENE.R_Transcript_169203~~R_Transcript_169203.p1 ORF type:complete len:288 (+),score=40.69 R_Transcript_169203:67-930(+)
ATGAGTCACAGTCACGCCCCTCTCGCCCAAACCCTTTACCATGGAAGCAACAATCTCGGAACCCCCACCACAAAAACTACTTGGGTTGTCAAATACGCAAGATTCTTCACCTTCCCATCTACTTCTACTGCCACCACATCCACCACTTTACGACCCCTTTTCCCCAAAACGAAACGCCTTGTTAAGGGCACTTGGGTTTCCTCTTTTTCCACCAATGTTTCCCTTCACATCCTATTTGACCGCCATGAACCAACCCTTGTTGTGTCTCATCTCAAAAACGTCTATGAAGAACACTATATCTCCAATCTGCATTTCACATGGCCTCAGGTGTCCTGTCCTCCTGAATCTGCTGTTCAAGGAAGCAGTGTGATATTTGCTAGTTTCAGAGACAGTATGCACCAGATCCAGAAGTTTGCTGTAAGGTTCTCTTCTTCTGTAGAATCTCAAGCTTTCATTGAATCTCTGAAGTGCTTGAGGGACACATGGAAGGTCAACTGTTCAAGGGGCACAACATCCACTTCCAGGCATCAGAGGATTGATAAAGAATCAAATTGTATAAATCGTCTTGTGGAGAGTAATACTACTACTACCCTGTGGCAACCTACCATCCATCAGGAACGTATTCAGCACTCGTATTCTCAACACACAATGCTAAGGGATGGTGTGGAAAGCAGTGATGCTGGTTTGCCTCGTAGCTTTACTGCACTTGTTAATGAGAGTTGTACTGAGACTGATCCAGGAGTACCTCCCCAGCACCAATCTCTCAAGGGAAGCGTTGCTGACTATTCTTTCTTAGATATGCTGGACAAGATTGAGTATGTCATTTCTGCACTGGGAGGGGACTTTGCATTTTCAGGAACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169203.p1 GENE.R_Transcript_169203~~R_Transcript_169203.p1 ORF type:complete len:288 (+),score=40.69 R_Transcript_169203:67-930(+)
MSHSHAPLAQTLYHGSNNLGTPTTKTTWVVKYARFFTFPSTSTATTSTTLRPLFPKTKRLVKGTWVSSFSTNVSLHILFDRHEPTLVVSHLKNVYEEHYISNLHFTWPQVSCPPESAVQGSSVIFASFRDSMHQIQKFAVRFSSSVESQAFIESLKCLRDTWKVNCSRGTTSTSRHQRIDKESNCINRLVESNTTTTLWQPTIHQERIQHSYSQHTMLRDGVESSDAGLPRSFTALVNESCTETDPGVPPQHQSLKGSVADYSFLDMLDKIEYVISALGGDFAFSGT*

Click here to download the sequence:
Link to NCBI Protein BLAST