Transcript Information: R_Transcript_169335.p1


Annotated TAIR IDAT3G47470.1
Annotated Gene Namelight-harvesting chlorophyll-protein complex I subunit A4
Annotated Gene Symbol(s)LHCA4, CAB4
Annotation TypeOrtholog
Chromosome Positionchr3:17493622-17494773 | Reverse length=251
E-Value1.7E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.972953896379
Replicate 24.4992072320639
Replicate 37.5446794463518
Condition 2: 8 Hour
Replicate 17.5789581979569
Replicate 23.0169443753981
Replicate 33.6735402446021
Condition 3: 24 Hour
Replicate 14.0996084335186
Replicate 24.0259599562165
Replicate 35.2982142297648


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169335.p1 GENE.R_Transcript_169335~~R_Transcript_169335.p1 ORF type:complete len:252 (+),score=56.63,Chloroa_b-bind|PF00504.17|3.4e-47 R_Transcript_169335:212-967(+)
ATGGCAGCTGTCACGACACAAGCTTCGATCGCCGGATTCCGGCCAAGCGCATCGAAATCGAGGTTCTTGAGTGGTGTTCCTGGCAAGCTTAACAAGGAAAGTGCCATAAGGTTGCCCTCATCTTCATCATCTAGTTCTCTTAGAGTTGAAGCCAAGAAAGGGGAATGGTTGCCTGGATTGGCTTCTCCAAACTACCTCAATGGCAGTCTTCCAGGAGACAATGGGTTTGATCCGTTGGGACTGGCAGAGGACCCAGAGAACTTGAAGTGGTTCGTACAAGCGGAGCTAGTGAATGGGAGGTGGGCAATGCTAGGGGTGGCAGGAATGCTTCTACCAGAAGTGTTTACAAAGATGGGGATCATCAATGTCCCAGCATGGTATGATGCAGGCAAGTCAGAGTACTTTGCCTCTTCATCAACCTTGTTTGTGATTGAATTCATCTTGTTTCACTATGTGGAGATTAGAAGATGGCAAGACATCAAGAACCCTGGAAGTGTTAACCAAGACCCTATTTTCAAGCAATACAGCTTGCCTCCTAATGAAGTTGGTTACCCTGGTGGTATCTTTAACCCTCTTAACTTTGCACCTACTCTTGAAGCCAAGGAGAAGGAGCTTGCTAATGGGAGATTGGCAATGTTGGCATTCTTAGGATTTATTGTTCAACACAATGTGACCGGAAAGGGAGCATTCGACAACCTTTTGCAGCACTTATCAGACCCATGGCACAACACCATTGTCCAGACATTGGGTAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169335.p1 GENE.R_Transcript_169335~~R_Transcript_169335.p1 ORF type:complete len:252 (+),score=56.63,Chloroa_b-bind|PF00504.17|3.4e-47 R_Transcript_169335:212-967(+)
MAAVTTQASIAGFRPSASKSRFLSGVPGKLNKESAIRLPSSSSSSSLRVEAKKGEWLPGLASPNYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKMGIINVPAWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGAFDNLLQHLSDPWHNTIVQTLGN*

Click here to download the sequence:
Link to NCBI Protein BLAST