Transcript Information: R_Transcript_16934.p1


Annotated TAIR IDAT5G27230.1
Annotated Gene NameFrigida-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9584255-9587838 | Forward length=948
E-Value5E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5224591186166
Replicate 20.98985278481188
Replicate 31.0383833905781
Condition 2: 8 Hour
Replicate 11.0433686786224
Replicate 21.3988221641358
Replicate 30.97093837407328
Condition 3: 24 Hour
Replicate 11.1031403291644
Replicate 21.3597077103892
Replicate 31.0914086652578


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16934.p1 GENE.R_Transcript_16934~~R_Transcript_16934.p1 ORF type:complete len:1103 (+),score=290.02,Frigida|PF07899.7|7.2e+03,Frigida|PF07899.7|1.6e+02,Frigida|PF07899.7|1.3e-24,Frigida|PF07899.7|9.6e-55 R_Transcript_16934:81-3311(+)
ATGGATGAGCGTTCTAAAGCATTAAATACGAAGGAGGAGATGATCAAGGGGCGTTTTCAAGAGCTGGAATCGAAGGAGAGTTTAATCAATGAGCATGTAAAAACTGTAAAATTGAGAGAGAAAGAAATGGATGAGCGTTCTAAAGCATTAAATACGAAGGAGGAGATGATCAAGGGGCGTTTTCAAGAGCTGGAACTGAAGGAAGGTTTAGTCAATGAGCATGAAAGAGCTCTAGAATTGAAAGAGAAAGAGTTGGAAGGCCGTTGCCAAGTGATTGATTTGGAGAAAGAAGAGATCAGAAAGCAGTTTATGGAGTTGGAGAATAAGGAGAAGGTATTGGTTGTTTGCAAGGAACATGAGTTGAGAGAGAAACAACTGGATGAGTGGTTTGACGAATTAGATAGGAGAGAAAAGCAAATCGAGGAGCGTTTGCAAGAGCGAAAGTTGAAAGAGAAGGAGCTTTCTGGGGAGTTGGAATTGAAAGTGGAGGAAATAGTTGAACTCCGTCGAGCACTTGAATTGAAAAAGGGTGAACTTAATGCGCGTTGCCAAGAGCTGGACTTGAGAGAGAAAGAAATCAGTGAGCGTTTGCAAGCAATGGAATCGAAAGAGAAGCAAAGTAATGAGCCTCATGGAGCTCAAGTATCGAGAGGGAAGCTGTTGAATGGTCGTCGAGCTAGAAGATTCACAGAAAAGAAACTTAATGAGCAGGAGGTGAAGAACAATGACATCATTGAGCGTTCCAAGGAACAGGTATTGAAGGACAATCAACTGTGTAACACTGACAGTATGGTGGTCAAAACTGCACCGCAAAGGGACTTGCGTACTGAAAACGAGTTTGTGAGCCTGAACTTAGGCAAGGAAATAGCTGGGAGAAGCTTGCAGATGGTACTGAATGATAGGGCTAATGACCATGAGTCAGAGTTACTGAAAGAAGAAGTTCGTAAGCTTCTGATCACTTCCAAGAACACTGCCAAGCTAGTGCTAGGTGCCCTCACTGGGTTTTTCCCGCCACATTTGAGGAAGGGACATGTGGTGTATGAAGCATGTGCTGTTAGGAGTAGTTGTGTGCTCCTGCTAGAGCAGTTATTGAACATGGACCCTGAAGTTTCTAGAGCTGTGAGGAAAGAAGCAAGGAAGGTTGCATTGTTGTGGAGAGAGAGAATGAGGAAAGAAGTGAGCCATACTGTGGTACTGGGATTTCTTTTGTTAGTGGCTGTATATCGCTTGGACAGACTGTTTAGGAGGAAGGATCTTAAGAAGTTATTTGAGATTATTGATGGGCACAGGTTAGCACCTGATTTGCGTCTCAGACTTGAATTGGTTGAAGAGAGCAATGATGTCCTGCACGTGACAAGCCCAGTTGCTTCATTAACCATGGACCTTTGCAACCCTATTGAACCTTTTTGCAGCAGTATGGATGCTGATGCTCTGAGAACATATCTCATTGAGCATATGACAGAGCATGATTTGTTTCAAGAGAATATTTTGGACACTCTTCGAGATGCACCAGATCCAGCACAACTGGTTTTTAATGTGGTTCGAACATTTGATCAACAGGGCTCAACCACAGTTAACAAAACTAGTTGCATATATTTGTTAGAGCAGTTAATGAAAATACAAAACCAACCACCAAGGAAGGACCGACTAGGTAGTGGAGAACAGTCCATGTTTCAGCCATATCAGGTTGCACCTAATTTGTATTATGAAGCTAAGTCTTTTGCTTCTATTTGGAAACGTAGATTGGCCATGGAAAAAACTGAACAGTTGGAGATTTATGGCTTTCTACAGTTTCTAGCCACGTACAAGTTAGCAAAGTCATATGATGCAGATGAACTCTTTAAACTTTTTAGACGACTTTATGATAGGGATGTCTACCGAGCTATGCAAAATCCATATTTATGCCGAGAATTGGGTTTGACAAAGAAAATACCAGGTTTTATCAAACAACTTATTGGGAGCAACAAAAGCCTTCAGGCAGTCAAGTACATACGTGCATTTATGCAGGAACATAGTTTTCCATTGGCTCCACTACTGAAAAAGCATGTAGAGTTCATCCAGGAAAAAGCCGTGAAGATACAGTTTCATGGAAAACCTTCTGCTGAGAAAAAGCTTAAATCGTTTGGCTTTGAGTTGGGCCATCTCAGAGCTGTAGTTCATCAGATCAAAGTCTGTGAGCTTGAGTCACAGTACTCATCTACCAATCTTGAATCACGCATCAAGGATTTGGAAATGGCCATTGCAGAATTGAAGCCTGTCTCTACAGAAGCAGAAGGGGATGTTATTGAGCGGGCTGTTTTGGGTATAGAAAAGGCAAGGGAAGAGACCAACTGCACGAAAAATTTAGAGGAAAAAACAGTGGAGGATGAATCGCCTCAGTTAGGAAAGGATATGACAGTCACAGACACGAATTCATCTGCTCCAACTCCGCCCTCTGACACAGAAAGAGGATCGCATGGTGACTTGAAACGTGCTGCCAGCTCCTACACCTCTACAGCACCACCACAGCAGCAAGCAAAGCGTCCGAGGGTTGGGCCTAGTCAACCGCCCTTACCACCCAGTATTCCTGTTTCAACCGTCCCTACTACCATGCATTCATCTCCAGTTATCCCACCTCTTCAAGGCTATTTTCCACAACCTCAACATAGACCTTTCCCATACGGACATCCAGGTCATGTGAGACCTATTGGCAATCCTGTATGGCCTCATCATGGACCATTGCCTTCTGCAAATGTGCCCCCATTCACTGCAAGTATACCATCTCCTCATTTATCTTCCACAAATGTACAACCTCATGGACCAATGCCTTCCACAAATATGCCCCCTTTCCCTGCAAGTAGATCATCTCCTCAGTTTTCTGCAAATGCACCACCTCATGGACCATTGACTTCCACAAATATGCCGCCTTTCCCTGCAAGTGGACCACCTCCTCAGTTATCTTCCGCAAATGCAGCACCTCATGGACCATTTCCTTCCACAAATATGCCCCATTTCGCTACAAGTAGACCATCTTCTCATTTATATTCAGCAAATGGACCACCTCCTGGTTATGGTGTCTCCCAGCAGATGGGCGTTCGTCCATTTGGGCCGGCTGGATTCTACCCTAGTGGCGGTCCTGCCCATGCTGGCGGTCAAGCTTGGAACACAATGACGTACATAGGCAAAACAATTTCACCTTCAATGCAAACAGCTCAACCCAAGGAGGATGCAGGTTATGAACTAGCCAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16934.p1 GENE.R_Transcript_16934~~R_Transcript_16934.p1 ORF type:complete len:1103 (+),score=290.02,Frigida|PF07899.7|7.2e+03,Frigida|PF07899.7|1.6e+02,Frigida|PF07899.7|1.3e-24,Frigida|PF07899.7|9.6e-55 R_Transcript_16934:81-3311(+)
MDERSKALNTKEEMIKGRFQELESKESLINEHVKTVKLREKEMDERSKALNTKEEMIKGRFQELELKEGLVNEHERALELKEKELEGRCQVIDLEKEEIRKQFMELENKEKVLVVCKEHELREKQLDEWFDELDRREKQIEERLQERKLKEKELSGELELKVEEIVELRRALELKKGELNARCQELDLREKEISERLQAMESKEKQSNEPHGAQVSRGKLLNGRRARRFTEKKLNEQEVKNNDIIERSKEQVLKDNQLCNTDSMVVKTAPQRDLRTENEFVSLNLGKEIAGRSLQMVLNDRANDHESELLKEEVRKLLITSKNTAKLVLGALTGFFPPHLRKGHVVYEACAVRSSCVLLLEQLLNMDPEVSRAVRKEARKVALLWRERMRKEVSHTVVLGFLLLVAVYRLDRLFRRKDLKKLFEIIDGHRLAPDLRLRLELVEESNDVLHVTSPVASLTMDLCNPIEPFCSSMDADALRTYLIEHMTEHDLFQENILDTLRDAPDPAQLVFNVVRTFDQQGSTTVNKTSCIYLLEQLMKIQNQPPRKDRLGSGEQSMFQPYQVAPNLYYEAKSFASIWKRRLAMEKTEQLEIYGFLQFLATYKLAKSYDADELFKLFRRLYDRDVYRAMQNPYLCRELGLTKKIPGFIKQLIGSNKSLQAVKYIRAFMQEHSFPLAPLLKKHVEFIQEKAVKIQFHGKPSAEKKLKSFGFELGHLRAVVHQIKVCELESQYSSTNLESRIKDLEMAIAELKPVSTEAEGDVIERAVLGIEKAREETNCTKNLEEKTVEDESPQLGKDMTVTDTNSSAPTPPSDTERGSHGDLKRAASSYTSTAPPQQQAKRPRVGPSQPPLPPSIPVSTVPTTMHSSPVIPPLQGYFPQPQHRPFPYGHPGHVRPIGNPVWPHHGPLPSANVPPFTASIPSPHLSSTNVQPHGPMPSTNMPPFPASRSSPQFSANAPPHGPLTSTNMPPFPASGPPPQLSSANAAPHGPFPSTNMPHFATSRPSSHLYSANGPPPGYGVSQQMGVRPFGPAGFYPSGGPAHAGGQAWNTMTYIGKTISPSMQTAQPKEDAGYELAN*

Click here to download the sequence:
Link to NCBI Protein BLAST