Transcript Information: R_Transcript_16937.p1


Annotated TAIR IDAT5G27230.1
Annotated Gene NameFrigida-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9584255-9587838 | Forward length=948
E-Value5E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1960829780963
Replicate 22.9331701730991
Replicate 33.7469022593176
Condition 2: 8 Hour
Replicate 15.1093405194959
Replicate 24.2705132428789
Replicate 35.3604225881603
Condition 3: 24 Hour
Replicate 14.6078003896453
Replicate 23.1591087005071
Replicate 34.8961885815959


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16937.p1 GENE.R_Transcript_16937~~R_Transcript_16937.p1 ORF type:complete len:1131 (+),score=294.62,Frigida|PF07899.7|6.7e+03,Frigida|PF07899.7|1.7e+02,Frigida|PF07899.7|1.3e-24,Frigida|PF07899.7|1e-54 R_Transcript_16937:81-3395(+)
ATGGATGAGCGTTCTAAAGCATTAAATACGAAGGAGGAGATGATCAAGGGGCGTTTTCAAGAGCTGGAATCGAAGGAGAGTTTAATCAATGAGCATGTAAAAACTGTAAAATTGAGAGAGAAAGAAATGGATGAGCGTTCTAAAGCATTAAATACGAAGGAGGAGATGATCAAGGGGCGTTTTCAAGAGCTGGAACTGAAGGAAGGTTTAGTCAATGAGCATGAAAGAGCTCTAGAATTGAAAGAGAAAGAGTTGGAAGGCCGTTGCCAAGTGATTGATTTGGAGAAAGAAGAGATCAGAAAGCAGTTTATGGAGTTGGAGAATAAGGAGAAGGTATTGGTTGTTTGCAAGGAACATGAGTTGAGAGAGAAACAACTGGATGAGTGGTTTGACGAATTAGATAGGAGAGAAAAGCAAATCGAGGAGCGTTTGCAAGAGCGAAAGTTGAAAGAGAAGGAGCTTTCTGGGGAGTTGGAATTGAAAGTGGAGGAAATAGTTGAACTCCGTCGAGCACTTGAATTGAAAAAGGGTGAACTTAATGCGCGTTGCCAAGAGCTGGACTTGAGAGAGAAAGAAATCAGTGAGCGTTTGCAAGCAATGGAATCGAAAGAGAAGCAAAGTAATGAGCCTCATGGAGCTCAAGTATCGAGAGGGAAGCTGTTGAATGGTCGTCGAGCTAGAAGATTCACAGAAAAGAAACTTAATGAGCAGGAGGTGAAGAACAATGACATCATTGAGCGTTCCAAGGAACAGGTATTGAAGGACAATCAACTGTGTAACACTGACAGTATGGTGGTCAAAACTGCACCGCAAAGGGACTTGCGTACTGAAAACGAGTTTGTGAGCCTGAACTTAGGCAAGGAAATAGCTGGGAGAAGCTTGCAGATGGTACTGAATGATAGGGCTAATGACCATGAGTCAGAGTTACTGAAAGAAGAAGTTCGTAAGCTTCTGATCACTTCCAAGAACACTGCCAAGCTAGTGCTAGGTGCCCTCACTGGGTTTTTCCCGCCACATTTGAGGAAGGGACATGTGGTGTATGAAGCATGTGCTGTTAGGAGTAGTTGTGTGCTCCTGCTAGAGCAGTTATTGAACATGGACCCTGAAGTTTCTAGAGCTGTGAGGAAAGAAGCAAGGAAGGTTGCATTGTTGTGGAGAGAGAGAATGAGGAAAGAAGTGAGCCATACTGTGGTACTGGGATTTCTTTTGTTAGTGGCTGTATATCGCTTGGACAGACTGTTTAGGAGGAAGGATCTTAAGAAGTTATTTGAGATTATTGATGGGCACAGGTTAGCACCTGATTTGCGTCTCAGACTTGAATTGGTTGAAGAGAGCAATGATGTCCTGCACGTGACAAGCCCAGTTGCTTCATTAACCATGGACCTTTGCAACCCTATTGAACCTTTTTGCAGCAGTATGGATGCTGATGCTCTGAGAACATATCTCATTGAGCATATGACAGAGCATGATTTGTTTCAAGAGAATATTTTGGACACTCTTCGAGATGCACCAGATCCAGCACAACTGGTTTTTAATGTGGTTCGAACATTTGATCAACAGGGCTCAACCACAGTTAACAAAACTAGTTGCATATATTTGTTAGAGCAGTTAATGAAAATACAAAACCAACCACCAAGGAAGGACCGACTAGGTAGTGGAGAACAGTCCATGTTTCAGCCATATCAGGTTGCACCTAATTTGTATTATGAAGCTAAGTCTTTTGCTTCTATTTGGAAACGTAGATTGGCCATGGAAAAAACTGAACAGTTGGAGATTTATGGCTTTCTACAGTTTCTAGCCACGTACAAGTTAGCAAAGTCATATGATGCAGATGAACTCTTTAAACTTTTTAGACGACTTTATGATAGGGATGTCTACCGAGCTATGCAAAATCCATATTTATGCCGAGAATTGGGTTTGACAAAGAAAATACCAGGTTTTATCAAACAACTTATTGGGAGCAACAAAAGCCTTCAGGCAGTCAAGTACATACGTGCATTTATGCAGGAACATAGTTTTCCATTGGCTCCACTACTGAAAAAGCATGTAGAGTTCATCCAGGAAAAAGCCGTGAAGATACAGTTTCATGGAAAACCTTCTGCTGAGAAAAAGCTTAAATCGTTTGGCTTTGAGTTGGGCCATCTCAGAGCTGTAGTTCATCAGATCAAAGTCTGTGAGCTTGAGTCACAGTACTCATCTACCAATCTTGAATCACGCATCAAGGATTTGGAAATGGCCATTGCAGAATTGAAGCCTGTCTCTACAGAAGCAGAAGGGGATGTTATTGAGCGGGCTGTTTTGGGTATAGAAAAGGCAAGGGAAGAGACCAACTGCACGAAAAATTTAGAGGAAAAAACAGTGGAGGATGAATCGCCTCAGTTAGGAAAGGATATGACAGTCACAGACACGAATTCATCTGCTCCAACTCCGCCCTCTGACACAGAAAGAGGATCGCATGGTGACTTGAAACGTGCTGCCAGCTCCTACACCTCTACAGCACCACCACAGCAGCAAGCAAAGCGTCCGAGGGTTGGGCCTAGTCAACCGCCCTTACCACCCAGTATTCCTGTTTCAACCGTCCCTACTACCATGCATTCATCTCCAGTTATCCCACCTCTTCAAGGCTATTTTCCACAACCTCAACATAGACCTTTCCCATACGGACATCCAGGTCATGTGAGACCTATTGGCAATCCTGTATGGCCTCATCATGGACCATTGCCTTCTGCAAATGTGCCCCCATTCACTGCAAGTATACCATCTCCTCATTTATCTTCCACAAATGTACAACCTCATGGACCAATGCCTTCCACAAATATGCCCCCTTCCCCTGCAAGTAGACCATCTCATTTATCTTCCACAAATGCACCACCCCATGGACCGTTGCCTTCCACAAATATGCCCCCTTTTCCTACAAGTAGATCATCTCCTCAGTTATTCTCCCCAAATGCACCACCTCATGGACCATTGACTTCCACAAATATGCCGCCTTTCCCTGCAAGTGGACCACCTCCTCAGTTATCTTCCGCAAATGCAGCACCTCATGGACCATTTCCTTCCACAAATATGCCCCATTTCGCTACAAGTAGACCATCTTCTCATTTATATTCAGCAAATGGACCACCTCCTGGTTATGGTGTCTCCCAGCAGATGGGCGTTCGTCCATTTGGGCCGGCTGGATTCTACCCTAGTGGCGGTCCTGCCCATGCTGGCGGTCAAGCTTGGAACACAATGACGTACATAGGCAAAACAATTTCACCTTCAATGCAAACAGCTCAACCCAAGGAGGATGCAGGTTATGAACTAGCCAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16937.p1 GENE.R_Transcript_16937~~R_Transcript_16937.p1 ORF type:complete len:1131 (+),score=294.62,Frigida|PF07899.7|6.7e+03,Frigida|PF07899.7|1.7e+02,Frigida|PF07899.7|1.3e-24,Frigida|PF07899.7|1e-54 R_Transcript_16937:81-3395(+)
MDERSKALNTKEEMIKGRFQELESKESLINEHVKTVKLREKEMDERSKALNTKEEMIKGRFQELELKEGLVNEHERALELKEKELEGRCQVIDLEKEEIRKQFMELENKEKVLVVCKEHELREKQLDEWFDELDRREKQIEERLQERKLKEKELSGELELKVEEIVELRRALELKKGELNARCQELDLREKEISERLQAMESKEKQSNEPHGAQVSRGKLLNGRRARRFTEKKLNEQEVKNNDIIERSKEQVLKDNQLCNTDSMVVKTAPQRDLRTENEFVSLNLGKEIAGRSLQMVLNDRANDHESELLKEEVRKLLITSKNTAKLVLGALTGFFPPHLRKGHVVYEACAVRSSCVLLLEQLLNMDPEVSRAVRKEARKVALLWRERMRKEVSHTVVLGFLLLVAVYRLDRLFRRKDLKKLFEIIDGHRLAPDLRLRLELVEESNDVLHVTSPVASLTMDLCNPIEPFCSSMDADALRTYLIEHMTEHDLFQENILDTLRDAPDPAQLVFNVVRTFDQQGSTTVNKTSCIYLLEQLMKIQNQPPRKDRLGSGEQSMFQPYQVAPNLYYEAKSFASIWKRRLAMEKTEQLEIYGFLQFLATYKLAKSYDADELFKLFRRLYDRDVYRAMQNPYLCRELGLTKKIPGFIKQLIGSNKSLQAVKYIRAFMQEHSFPLAPLLKKHVEFIQEKAVKIQFHGKPSAEKKLKSFGFELGHLRAVVHQIKVCELESQYSSTNLESRIKDLEMAIAELKPVSTEAEGDVIERAVLGIEKAREETNCTKNLEEKTVEDESPQLGKDMTVTDTNSSAPTPPSDTERGSHGDLKRAASSYTSTAPPQQQAKRPRVGPSQPPLPPSIPVSTVPTTMHSSPVIPPLQGYFPQPQHRPFPYGHPGHVRPIGNPVWPHHGPLPSANVPPFTASIPSPHLSSTNVQPHGPMPSTNMPPSPASRPSHLSSTNAPPHGPLPSTNMPPFPTSRSSPQLFSPNAPPHGPLTSTNMPPFPASGPPPQLSSANAAPHGPFPSTNMPHFATSRPSSHLYSANGPPPGYGVSQQMGVRPFGPAGFYPSGGPAHAGGQAWNTMTYIGKTISPSMQTAQPKEDAGYELAN*

Click here to download the sequence:
Link to NCBI Protein BLAST