Transcript Information: R_Transcript_16956.p1


Annotated TAIR IDAT4G31980.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15464905-15469204 | Forward length=680
E-Value1E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.147557799478
Replicate 28.2433512027036
Replicate 310.474674466601
Condition 2: 8 Hour
Replicate 16.2204275847505
Replicate 25.9388023365735
Replicate 37.1264983959949
Condition 3: 24 Hour
Replicate 17.7939899826155
Replicate 27.5894539831317
Replicate 36.9757580757317


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16956.p1 GENE.R_Transcript_16956~~R_Transcript_16956.p1 ORF type:complete len:433 (+),score=53.36,DUF247|PF03140.11|6.8e-104 R_Transcript_16956:158-1456(+)
ATGGGAGATTCGTGGGTAGTAGCTTCAATTGAACACAAGCTTAAATCTTTGCCTGCACTTTCCTCTTATTGCTCCATTTATAGAGTTCCTGAGAACCTTCGTAAGGTAAATGAAGATGCTTATCGACCTTTGCTCGTCTCAATTGGTCCTTTCTATTATAATGATCCAAAGCTATTGGCTATGCAAGAACAAAAGTTGAGGTACTTGCAATCTTTCCTTCGGCGAAATAGTTCTTACAATATAGGTCAATATGTTGAAGCTATAAGAGGATGGGAGCAGCTTGCTCGTCAATGTTATGCTGAGATGATTAATCTAACTAGTGAAATTTTCATCGAAATGGTTCTAACTGATGCTGCATTCATCATTGAGCTTTTCAGGAGGGGTTATTTCCATCAAGAAATTGAGGAAAATGATCGTATATTCTACAAGCCAAGGATGATAGTGGAAGTCAGTCGTGATATAAGGTTAGAAGAAAACCAACTTCCGCTTTTCGTTCTCAAGAGTCTATATGACCTAGCATTTGGTCCCTCTCCAAATTCTTTTGTCGATCTTGCCTACAAATTTCTTATGAGAACACAGCGCAATTTTCCTCAAGAAATAGCAAATGTGGACATTAAACATCTTGTTGATTTCCTACGATTATGTTACTTGCCATCTACTCGTAGGAGAGAACACACTAATGACAACCAACTTTCCTCCAGTTTAATTGAGCCAAGTAGGAGAGAACATCCTAGCAGCAACCCAATGGTTTTCTCTCCTAATGTTACCCGACTAAGTGAAGCAGGAGTCAAATTTAGGGTCAGAGAAACTGAGAACTTGCTTGATATAAGATTCAGGAAGGCAAATGGGGTATTAGAGATCCCCAAGTTAATGGTGACAGATGAAACAGAATCTTTGTTCCGTAACGTCATGGTCTTTGAGCAATGTCATTATTACTTTGATTCTTACATCATCGATTACTTTGCTTTCCTGGGCAGTCTTATTGACACTCCAAAGGATGTGGAAATACTCATTCAAAACGATATAATTGAAAATTGGGTGGGGAGCAACAAGGAAGTAGCAGATCTGTTTAACAACTTCTTCAAGCAGACAAGGCTGCAAAATGCCAACTTCTATTACTCAAGTGTTTGTTGTGATTTGTATGCATACACTAAGACTCGATGGCATGAATGGAAGGCGATTTTGAAGCGCGACTATTTCAACCATCCTTGGTCAATCATTTCTGTAGTAGCTGCAGCTGTGCTTCTAGTCCTTACCTTATCACGGACTGTAAGTGGTTTTATAAATAAAAGTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16956.p1 GENE.R_Transcript_16956~~R_Transcript_16956.p1 ORF type:complete len:433 (+),score=53.36,DUF247|PF03140.11|6.8e-104 R_Transcript_16956:158-1456(+)
MGDSWVVASIEHKLKSLPALSSYCSIYRVPENLRKVNEDAYRPLLVSIGPFYYNDPKLLAMQEQKLRYLQSFLRRNSSYNIGQYVEAIRGWEQLARQCYAEMINLTSEIFIEMVLTDAAFIIELFRRGYFHQEIEENDRIFYKPRMIVEVSRDIRLEENQLPLFVLKSLYDLAFGPSPNSFVDLAYKFLMRTQRNFPQEIANVDIKHLVDFLRLCYLPSTRRREHTNDNQLSSSLIEPSRREHPSSNPMVFSPNVTRLSEAGVKFRVRETENLLDIRFRKANGVLEIPKLMVTDETESLFRNVMVFEQCHYYFDSYIIDYFAFLGSLIDTPKDVEILIQNDIIENWVGSNKEVADLFNNFFKQTRLQNANFYYSSVCCDLYAYTKTRWHEWKAILKRDYFNHPWSIISVVAAAVLLVLTLSRTVSGFINKSS*

Click here to download the sequence:
Link to NCBI Protein BLAST