Transcript Information: R_Transcript_16959.p1


Annotated TAIR IDAT4G31980.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15464905-15469204 | Forward length=680
E-Value1E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.7172847537982
Replicate 24.8228161049037
Replicate 35.7931192528553
Condition 2: 8 Hour
Replicate 13.1246463389756
Replicate 24.565562881727
Replicate 36.106690347926
Condition 3: 24 Hour
Replicate 14.1547771780996
Replicate 25.8336415627049
Replicate 34.9260031429908


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16959.p1 GENE.R_Transcript_16959~~R_Transcript_16959.p1 ORF type:complete len:431 (+),score=55.74,DUF247|PF03140.11|5.2e-101 R_Transcript_16959:288-1580(+)
ATGGGAGATTCGCAGGTGTTAGATTCAATTGAAGACAAGCTTAAATCTTTGCCTGCTCTTTCCTCTTATTGCTCCATTTATAGAGTTCCTGAGAACCTACGTAAGGTAAATGAAGTTGCTGATCGACCTTTGCTTGTCTCAATCGGTCCTTTCTATTATAATGATCCAAAGCTATTGGCTATGCAAGAACAAAAGTTGAGGTACTTGCAATCTTTCCTTCGGCGAAATAGTTCTTACAATATAGGTCAATATGTTGAAGCTATAAGAGGATGGGAGCAGCTTGCTCGTCAATGTTATGCTGAGATGATTAATCTAACTAGTGAAATTTTCATCGAAATGGTTCTAACTGATGCTGCATTCATCATTGAGCTTTTCAGGAGGGGTTATTTCCATCAAGAAATTGAGGAAAATGATCGTATATTCTACAAGCCAAGGATGATAGTGGAAGTCAGTCGTGATATAAGGTTAGAAGAAAACCAACTTCCGCTTTTCGTTCTCAAGAGTCTATATGACCTAGCATTTGGTCCCTCTTCAAATTCTTTCATCGACCTTGCCTACAAATTTCTTATGAGAACGAAGCGAAATGTTCCTCAAGAAATAGCAAATGTAGACATTAAACATCTTGTTGATTTTCTACGATTATGTTACGTACCTTCTACTCGTAGGAGAGAAAAAGCTAGTGACAACCAAATTTCTTCCAGTATAATTGAACCAAATAGGAGAGAACATCCTAGCAGCAACCCAATGGTTTTCTCTCCTAATGTTACCCGACTAAGTGAAGCAGGAGTCAAATTTAGGGTCAGAGAAACTGAGAACTTGCTTGATATAAGATTCAGGAAGGCAAATGGGGTATTAGAGATCCCCAAGTTAATGGTGACAGATGAAACAGAATCTTTGTTCCGTAACGTCATGGTCTTTGAGCAATGTCATTATTACTTTGATTCTTACATCATCGATTACTTTGCTTTCCTGGGCAGTCTTATTGACACTCCAAAGGATGTGGAAATACTCATTCAAAACGATATAATTGAAAATTGGGTGGGGAGCAACAAGGAAGTAGCAGATCTGTTTAACAACTTCTTCAAGCAGACAAGGCTGCAAAATGCCAACTTCTATTACTCAAGTGTTTGCTGTGATTTGTATGCATACACTAGGACTCAATGGCATGAATGGAAGGCCATTTTGAAGCGCGACTATTTCAACCATCCTTGGTCAATCATTTCTGTAGTAGCTGCAGCTGTGCTTCTAGTCCTTACCATATTACAGACTGTAAGTGGTTTTACTAATAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16959.p1 GENE.R_Transcript_16959~~R_Transcript_16959.p1 ORF type:complete len:431 (+),score=55.74,DUF247|PF03140.11|5.2e-101 R_Transcript_16959:288-1580(+)
MGDSQVLDSIEDKLKSLPALSSYCSIYRVPENLRKVNEVADRPLLVSIGPFYYNDPKLLAMQEQKLRYLQSFLRRNSSYNIGQYVEAIRGWEQLARQCYAEMINLTSEIFIEMVLTDAAFIIELFRRGYFHQEIEENDRIFYKPRMIVEVSRDIRLEENQLPLFVLKSLYDLAFGPSSNSFIDLAYKFLMRTKRNVPQEIANVDIKHLVDFLRLCYVPSTRRREKASDNQISSSIIEPNRREHPSSNPMVFSPNVTRLSEAGVKFRVRETENLLDIRFRKANGVLEIPKLMVTDETESLFRNVMVFEQCHYYFDSYIIDYFAFLGSLIDTPKDVEILIQNDIIENWVGSNKEVADLFNNFFKQTRLQNANFYYSSVCCDLYAYTRTQWHEWKAILKRDYFNHPWSIISVVAAAVLLVLTILQTVSGFTNK*

Click here to download the sequence:
Link to NCBI Protein BLAST