Transcript Information: R_Transcript_169729.p1


Annotated TAIR IDAT1G33710.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12219657-12220289 | Forward length=210
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.57040502983496
Replicate 20.43742292533954
Replicate 30.5965296248998
Condition 2: 8 Hour
Replicate 10.12753054660023
Replicate 20.4658517050247
Replicate 30.1890792772957
Condition 3: 24 Hour
Replicate 10.95657530115434
Replicate 20.11487114005509
Replicate 30.22799692382185


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169729.p1 GENE.R_Transcript_169729~~R_Transcript_169729.p1 ORF type:complete len:192 (+),score=20.10,zf-RVT|PF13966.2|6.4e-16,zf-RVT|PF13966.2|34 R_Transcript_169729:714-1289(+)
ATGTCAAAGGTTGAAGAATTCAATGAGTCAGAAGGACAGTATCAAGCAAATCTACAAAGAATTAAGGGGGGATACCCAAGAGTAAAGTGGTGTAATCTCATTTGCCAAAATCAGGCTAGACCAAGAGCTGGGATTTCTCTTTGGATCTTTCTATTACAGAGGCACTTCACTGCGGATAGAATGAGTAAATGGGGTATGCAATGTGACCAAATGTGCAGGCTATGCAATCAGCAGCAAGAGAACCATCAGCATATTTTGTTTCAGTGCAGATTTACTCTAAACATTTGGAGAGAGGTCTTGCACAGGTTCAACATTGCAGCAGCAGATGAGGTCAAGCATAGAGACTGGAATGAAGGAACGCAATGGATGATATGCAATAGTAAGGGGAAAGGAGGAAAACAACTTTTATTCAAAATGGTGTGTGCTAAGGTGTGGTACATCACATGGTGTGAAAGGAATAGAAGAACCTTTGAAAAGGTTGAAAAGCAGAGGGATCTTCTATGTAGAGAGGTAGTGTATAATGTGAGTGTTAGATATAGAGGCTGGGTTAAACTTGAACATTATCTGATAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169729.p1 GENE.R_Transcript_169729~~R_Transcript_169729.p1 ORF type:complete len:192 (+),score=20.10,zf-RVT|PF13966.2|6.4e-16,zf-RVT|PF13966.2|34 R_Transcript_169729:714-1289(+)
MSKVEEFNESEGQYQANLQRIKGGYPRVKWCNLICQNQARPRAGISLWIFLLQRHFTADRMSKWGMQCDQMCRLCNQQQENHQHILFQCRFTLNIWREVLHRFNIAAADEVKHRDWNEGTQWMICNSKGKGGKQLLFKMVCAKVWYITWCERNRRTFEKVEKQRDLLCREVVYNVSVRYRGWVKLEHYLIA*

Click here to download the sequence:
Link to NCBI Protein BLAST