Transcript Information: R_Transcript_169729.p2


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value1E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20980414890481
Replicate 20.24133678639423
Replicate 30.26329583443853
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.20863920253318
Condition 3: 24 Hour
Replicate 10.26388284169775
Replicate 20.2535087228802
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169729.p2 GENE.R_Transcript_169729~~R_Transcript_169729.p2 ORF type:5prime_partial len:174 (+),score=31.92,RVT_1|PF00078.23|1.4e-05 R_Transcript_169729:1-522(+)
CTCTGTTTTACAGATGATCTAATGCTTTTTTCCAGAGGAGATTTGGGGTCAATCAAGCTTCTTCATAAAGCCTTCAGCAAGTTTTCAAAGGCTTCTGGGATGCAGGCCAATATGGGAAAGAGCAGTATTTATTGTGGTGGAATGGATGATAATGAGATCACACAGGTTGCTACTTTCCTTGGACTTAAAAAGGAAAACCTACCTGTGAAGTATCTAGGACTGCCTCTGTCAACAAAGAAGATTATTATTGCCCAATGTATGCCACTGATAGAGAAAATGACAGCAAGAATACAGTCCTGGACTTCTAGATTCCTCTCTCTGGCTAGCAGGTTGCAACTAGTCAGATCTGTGCTATATGGTATTCAAGCATATTGGTCACAAATTTTGCTACTACCTAAGAAAGTCATAAACAAGATTGAATCAATCTGTTTAAGGTTCCTGTGGAGAGGCAAGGATGATGGGAAATGGGGAACTAAAGTGGCTTGGAGGGATGTTTGTACACCTAAGGTGGCTGGAGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169729.p2 GENE.R_Transcript_169729~~R_Transcript_169729.p2 ORF type:5prime_partial len:174 (+),score=31.92,RVT_1|PF00078.23|1.4e-05 R_Transcript_169729:1-522(+)
LCFTDDLMLFSRGDLGSIKLLHKAFSKFSKASGMQANMGKSSIYCGGMDDNEITQVATFLGLKKENLPVKYLGLPLSTKKIIIAQCMPLIEKMTARIQSWTSRFLSLASRLQLVRSVLYGIQAYWSQILLLPKKVINKIESICLRFLWRGKDDGKWGTKVAWRDVCTPKVAGG*

Click here to download the sequence:
Link to NCBI Protein BLAST