Transcript Information: R_Transcript_169732.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value9E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70203695979687
Replicate 20.58730910255379
Replicate 30.32037395239374
Condition 2: 8 Hour
Replicate 10.42807456201478
Replicate 21.0945886215965
Replicate 31.4597449100311
Condition 3: 24 Hour
Replicate 10.64217642594976
Replicate 20.38558144913597
Replicate 30.8418347956499


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169732.p1 GENE.R_Transcript_169732~~R_Transcript_169732.p1 ORF type:complete len:286 (+),score=40.27,RVT_1|PF00078.23|3.5e-17 R_Transcript_169732:3083-3940(+)
ATGATGTGTGTTACCACCACAAGTTTTCAGTTAAACATTAATGGTAGATTACATCAAGAATTCATAGGAGGAAAAGGTATTAGACAGGGAGATCCTATGTCCCCCCTGCTGTTTGTGATGGTGATGGAATATCTCACAAGACTCTTGAAAAAGACTAGTCTCAAGCCTGGATTTAAATATCAACGCATGTGTAATAACCTTGGTCTAACAAACTTATGCTTTGCAGATGATTTAATGTTATTTCGCAAAGCTGATATGATGTCAATTGATCACATGATGAAAAGCTTTGAGGTATTCTCTGGGGCTACTGGACTTCAAGCAAACTTACAGAAATCCCAAATCTACTTGGGAGGTGTATCTAGGGAGCAGAAAAGGCAGATAATACAGATTACTGGATTCAAGGAAGGAGACTTCCCTATGAAATATTTAGGGATGCCTCTATCTCACACAAAATGGAGTAAAACTGATTGTCACTTCTTGGTGGAGAAGATCATAAAGAGGATACACTCTTGGAGTAGTAGGAACTTATCGCTGGCTGGGAGAACACAGTTAATCAATTCTGTATTGTACTCTATGCATGTGTACTGGGCTTCTATCTTTCTTACTGGTGTTGTGAAACTTATTGAACAGCAATGCAGGCAATTCCTTTGGGGGCAGCAAGCTGGGAGTAAGAAGATTCCTTTGGTTGCATGGGATAATGTTTGCAAACCAAAAAGCTGTGGTGGTTTGAGTGTTAAGAATTGTAAAATTTGGAATAGGGCAGCAATTACTAAACACCTCTGGGCTGTTGCAAAGAAAAAAGATTGCTTATGGGTGAAATGGGTGAATGGAGTCTATCTTCAAGGGGAAGACATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169732.p1 GENE.R_Transcript_169732~~R_Transcript_169732.p1 ORF type:complete len:286 (+),score=40.27,RVT_1|PF00078.23|3.5e-17 R_Transcript_169732:3083-3940(+)
MMCVTTTSFQLNINGRLHQEFIGGKGIRQGDPMSPLLFVMVMEYLTRLLKKTSLKPGFKYQRMCNNLGLTNLCFADDLMLFRKADMMSIDHMMKSFEVFSGATGLQANLQKSQIYLGGVSREQKRQIIQITGFKEGDFPMKYLGMPLSHTKWSKTDCHFLVEKIIKRIHSWSSRNLSLAGRTQLINSVLYSMHVYWASIFLTGVVKLIEQQCRQFLWGQQAGSKKIPLVAWDNVCKPKSCGGLSVKNCKIWNRAAITKHLWAVAKKKDCLWVKWVNGVYLQGEDI*

Click here to download the sequence:
Link to NCBI Protein BLAST