Transcript Information: R_Transcript_169732.p2


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2617254116165
Replicate 20.67730001342897
Replicate 32.2167810576922
Condition 2: 8 Hour
Replicate 11.2412189604594
Replicate 21.2365464612637
Replicate 32.0075514050198
Condition 3: 24 Hour
Replicate 10.95216712004303
Replicate 21.5245570661689
Replicate 32.4207599653711


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169732.p2 GENE.R_Transcript_169732~~R_Transcript_169732.p2 ORF type:complete len:217 (+),score=24.32,zf-RVT|PF13966.2|3.7e-17,zf-RVT|PF13966.2|3.5e+03,zf-RVT|PF13966.2|8.7e+03 R_Transcript_169732:3956-4606(+)
ATGGACTGTGCCTGGTACTGGAAGAATATTAATAAATTGAGGGAGCACAAGCCTTTCCAAAATGGTTGCTGGCCTGTTAATGGAGAAGGACAATATACAATTGCCTTAGGATATAAAAGCCTACTGGGTGATCAGGCAAAATTCACTCTGTCACGAATCACTTGGGATAAGCTCACTGTGCCTAAGCATGCTATATATATGTGGATAATTACTCAAGAAAAACTCTTAACTAGAGACCTATTGGTGAAGATGAGAATTGCCATCTCTGATGATCAATGTCCCATGTGTCAACAGTCTACTGAGACTATAGAGCACCTATTCTTCACTTGCAATTACTCGAAAGAAGTTATGAATGAGATTATCAGGTGGCTAGGAATCAGACATGCACCTATTGAGAATCTGAAGTGGATGGAATGGCTAAGGAAACTTAGAAGCCCTAACAAGAAGAAAATGGTGATTTATTCAGTCTTTGCTGCTGCAGTGTACTTCCTGTGGGTGGAAAGAAACAAGATCATCTTCAAGCAAAGCAATATACAGCCACAGCAAATTGTGGCAGAAGTTAAGCATATCATTAGAATGAAGATAGCCATCCTACCTTGTAAAAACTTGAGTAACAAAACACTTATGTATTTATTTTCGTTGTTAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169732.p2 GENE.R_Transcript_169732~~R_Transcript_169732.p2 ORF type:complete len:217 (+),score=24.32,zf-RVT|PF13966.2|3.7e-17,zf-RVT|PF13966.2|3.5e+03,zf-RVT|PF13966.2|8.7e+03 R_Transcript_169732:3956-4606(+)
MDCAWYWKNINKLREHKPFQNGCWPVNGEGQYTIALGYKSLLGDQAKFTLSRITWDKLTVPKHAIYMWIITQEKLLTRDLLVKMRIAISDDQCPMCQQSTETIEHLFFTCNYSKEVMNEIIRWLGIRHAPIENLKWMEWLRKLRSPNKKKMVIYSVFAAAVYFLWVERNKIIFKQSNIQPQQIVAEVKHIIRMKIAILPCKNLSNKTLMYLFSLLK*

Click here to download the sequence:
Link to NCBI Protein BLAST