Transcript Information: R_Transcript_169733.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value9E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45919398628223
Replicate 20.33013050969022
Replicate 30.43220259615382
Condition 2: 8 Hour
Replicate 10.46199745183481
Replicate 20.49222066946006
Replicate 30.62788590196307
Condition 3: 24 Hour
Replicate 10.57755489881017
Replicate 20.34678080016631
Replicate 31.1700974203687


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169733.p1 GENE.R_Transcript_169733~~R_Transcript_169733.p1 ORF type:complete len:318 (+),score=43.82,RVT_1|PF00078.23|6.3e-30 R_Transcript_169733:347-1300(+)
ATGATTATTCAAGATATAATCAGGTTGTACAACGACAGGAAGAATGTCTCCCCTAGATGTCTGATGAAAATAGATATGCGAAAGGCATATGGCACTGTTGATTGGAATTTTCTTGAGAATATCTTGAAGGGCTTAGGCTGTCCTTTTAAATTTGTCAGATGGATTATGATGTGTGTTACTACCACAAGTTTCCAATTAAACATCAATGGTAAATTGCATCAAGAATTCAAAGGAGGAAAGGGTATTAGACAGGGTGATCACATGTCCCCCCTGTTGTTTGTGATGGTGATGGAATATCTCACAAGAATCTTGAAAAAGACAAGCCTCAAACCTGGTTTTAAGTATCATCCCATGTGTAAAAACCTTGGCCTAACAAAACTATGCTTTGCTGATGATTTAATGTTGTTTTGCAAAGCTGATATAATATCAATTGATCACTTGATGAAAAGCTTCGAGGCATTCTCTGGGGCTACTGGACTCCAAGCAAACTTACAGAAATCCCAAATCTACTTGGGAGGTGTTACCAGGGAGCAAAAGAGGAAGATAATGCAGACCACTGGATTCAAGGAAGGAGACTTCCCTATGAAATATTTGGGGATGCCTCTATCCCCCACAAAATGGAATAAAGCTGATTGTCACTTTCTGATGGAGAAGATAATTAAGAGGTTACATTCTTGGGGTAGCTGGAACCTCTCTCTGGTTGGGAGAACACAGTTAATCAATTCTGTACTGTACTCTATGCATGTGTATTGGACTTCTATCTTCGTAATCCATACTGGTGTTGTGAAACTCATTGAACAGCAGTGCAGGCAATTCCTTTGGGGGCAGCAAGCTGGGAGTAAGAAGATTCCTTTGGTTGCATGGGATAATGTTTGCAAACCAAAAAGCTGTGGTGGTTTGAGTGTTAAGAATTGTAAACTCTGGAATAGGGCAGCAATTGCTAAGTACCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169733.p1 GENE.R_Transcript_169733~~R_Transcript_169733.p1 ORF type:complete len:318 (+),score=43.82,RVT_1|PF00078.23|6.3e-30 R_Transcript_169733:347-1300(+)
MIIQDIIRLYNDRKNVSPRCLMKIDMRKAYGTVDWNFLENILKGLGCPFKFVRWIMMCVTTTSFQLNINGKLHQEFKGGKGIRQGDHMSPLLFVMVMEYLTRILKKTSLKPGFKYHPMCKNLGLTKLCFADDLMLFCKADIISIDHLMKSFEAFSGATGLQANLQKSQIYLGGVTREQKRKIMQTTGFKEGDFPMKYLGMPLSPTKWNKADCHFLMEKIIKRLHSWGSWNLSLVGRTQLINSVLYSMHVYWTSIFVIHTGVVKLIEQQCRQFLWGQQAGSKKIPLVAWDNVCKPKSCGGLSVKNCKLWNRAAIAKYL*

Click here to download the sequence:
Link to NCBI Protein BLAST