Transcript Information: R_Transcript_169751.p1


Annotated TAIR IDAT5G40410.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16171385-16173211 | Forward length=608
E-Value2.6E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4672798195112
Replicate 20.43882942992263
Replicate 31.2521367817833
Condition 2: 8 Hour
Replicate 11.7321190637923
Replicate 20.79089935772682
Replicate 31.9552377999452
Condition 3: 24 Hour
Replicate 11.7347539223506
Replicate 21.2765101608694
Replicate 32.1817326215235


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169751.p1 GENE.R_Transcript_169751~~R_Transcript_169751.p1 ORF type:complete len:622 (+),score=115.90,PPR_2|PF13041.2|44,PPR_2|PF13041.2|7.4e-09,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|5.3,PPR_2|PF13041.2|8.7e-12,PPR_2|PF13041.2|3.5e-05,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|14,PPR|PF01535.16|7.3,PPR|PF01535.16|0.00045,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.0038,PPR|PF01535.16|0.00074,PPR|PF01535.16|0.17,PPR|PF01535.16|4e-06,PPR|PF01535.16|0.0024,PPR|PF01535.16|0.0063,PPR|PF01535.16|7.9e+03,PPR|PF01535.16|2.1,DYW_deaminase|PF14432.2|3.5e-39,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.0071,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.41,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.0056,PPR_1|PF12854.3|0.0039,PPR_1|PF12854.3|3.9e+03,PPR_3|PF13812.2|84,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|18,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|8.2e+03,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|1.6e+04 R_Transcript_169751:95-1960(+)
ATGGTAATAGCTCTTCACTCTTCACCCAACTCCTATCCTTTGCTCCCCAAAACAAGCATAATTTTCAAAAATTCAGTTCGCAATATCAAAAAATTTGTAATCTTTTTAAGCAATGTAGCTACCCTGAAGAGAACTTCCACTTCTCTTCAATCTCTACTTCATGATGTGAGCTCTTGCTCCTCCCCTTTACATTGCCAGGCAATCCACGCCATTGTGATCAAATCCCATTTCATCAATGACGGCTTCATTGGTGACCGTTTGGTGTCCCTTTATGCCAAAATTGGTCATGACAATGATGCACACAAGCTGTTTGATGAAATTCCTGACAGAGATTTGGTCTCTTGGAATTCTTTCATTTCGGCATTTTGTCGAAAGGGGAGCTTGAGTCTTTGCTGGAATTCTTTTCGTCGGATGAGGGTTGAGGCGGGTTTGGAGCCTAATGAGGTGACACTCTTATCCATGGTTTCTGCTTTTACTAATGCTGGAGCATTGGATGGTGGGAAATGCTTTCATGGGTTTGGTATGAAAATTGGATATATGGGGGAAGTTAAGGTTGTTAATGCATTGATTAATATGTATGGGAAGTTGGGTGTATTGGATGGGGCATATAACTTGTTTTGTGACATGGAAATGCCTAACTTAGTTTCATGGAACTCACTTCTTGCTATACATGCTCAAATGGGGTTAACTGATGAAGTTATACATTTTTTTAATGCAATGAGAAGAGGAGGAAATAGGCCTGATCAAGCCACTATGGTTAGCTTGCTTCAAGGGTGTACAGAATTGGGCATTGCTAAACAGGCAAGAGTTATTCATGGTTATATATTCAAGTGTGGATTCGACTCTGATATGCTTGTTGTGACGTCTCTTATGAGCATATATTCAAAGTCAGGACAGTTGAATGTTGCACTAGATGTGTTCAGAGGGTTAAACGATCCAGATAGAATAGCTTGGACGGCTATACTAGCAAGCTATGCTGTGCATGGGCGTGGGAGGGAAGCGATGAAGCTTTTTGACAACATGGTTAAGAGAGGGGTTCAACCTGATCATGTTTCCTTCACTCACTTGTTGAGTGCTTGCAGCCATGCTGGTCTTGTTTCAGAAGGCAGGAAGTACTTTGAGGATATGTCGAGGGTTTTTGGGATTCATCCTCGTGTAGATCACTATTCCTGTATGGTGGATTTGTTAGGTCGTTCAGGGCTTTTGGAAGATGCATATGAGGTGATTAGGAGCATGCCAATGGAGCCAAATGCTGGTGTTTGGGGTGCTCTACTTAGTGCTTGTAGGATTCATCACAACACAGAACTAGGAAAAGAAGCAGCAGAGAAAATGTTCTTGTTAGATTCTTCTGATCACAGAAACTATGTCATGCTTTCTAATATATATTCTGCTTCTGGTCGATGGAAGGATGCTTCAAAAATTCGGTCTATGATGAAGGAAAGGCGCCTAGTCAGAAACCCTGGATATAGTCTGATTGAACATGGAAACAGAGTTTATCAGTTTGTTGTGGGTGATCAGTCTCATCCTGATTCTGATAAGATCTATGCAAAGTTGGATGAAGTTCTCAGGAAGGTATGTGAAGCTGGGCTTGTGCGCCAAACAGAATTCGTTTTGCATGATGTTGAGGAGGATGTCAAGGTTGATATGATCAATAAGCACATTGAAAAGCTGGCACTTGCTTTCGGTTTGCTGGTGACTGATAATTACATGCCGATTACTATAATAAAGAACCTCAGAATCTGTGGTGATTGTCACTCCGTGATGAAGCTTGTATCAGCTATTGAGAAGCGTACTATCATCGTTCGAGATCCGAAACGGTTTCATCACTTTGTTAATGGAATTTGTTCTTGCAACGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169751.p1 GENE.R_Transcript_169751~~R_Transcript_169751.p1 ORF type:complete len:622 (+),score=115.90,PPR_2|PF13041.2|44,PPR_2|PF13041.2|7.4e-09,PPR_2|PF13041.2|0.018,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|5.3,PPR_2|PF13041.2|8.7e-12,PPR_2|PF13041.2|3.5e-05,PPR_2|PF13041.2|2.2,PPR_2|PF13041.2|14,PPR|PF01535.16|7.3,PPR|PF01535.16|0.00045,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|0.0038,PPR|PF01535.16|0.00074,PPR|PF01535.16|0.17,PPR|PF01535.16|4e-06,PPR|PF01535.16|0.0024,PPR|PF01535.16|0.0063,PPR|PF01535.16|7.9e+03,PPR|PF01535.16|2.1,DYW_deaminase|PF14432.2|3.5e-39,PPR_1|PF12854.3|3.1e+02,PPR_1|PF12854.3|0.0071,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.41,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.22,PPR_1|PF12854.3|0.0056,PPR_1|PF12854.3|0.0039,PPR_1|PF12854.3|3.9e+03,PPR_3|PF13812.2|84,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|18,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|8.2e+03,PPR_3|PF13812.2|13,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.35,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|1.6e+04 R_Transcript_169751:95-1960(+)
MVIALHSSPNSYPLLPKTSIIFKNSVRNIKKFVIFLSNVATLKRTSTSLQSLLHDVSSCSSPLHCQAIHAIVIKSHFINDGFIGDRLVSLYAKIGHDNDAHKLFDEIPDRDLVSWNSFISAFCRKGSLSLCWNSFRRMRVEAGLEPNEVTLLSMVSAFTNAGALDGGKCFHGFGMKIGYMGEVKVVNALINMYGKLGVLDGAYNLFCDMEMPNLVSWNSLLAIHAQMGLTDEVIHFFNAMRRGGNRPDQATMVSLLQGCTELGIAKQARVIHGYIFKCGFDSDMLVVTSLMSIYSKSGQLNVALDVFRGLNDPDRIAWTAILASYAVHGRGREAMKLFDNMVKRGVQPDHVSFTHLLSACSHAGLVSEGRKYFEDMSRVFGIHPRVDHYSCMVDLLGRSGLLEDAYEVIRSMPMEPNAGVWGALLSACRIHHNTELGKEAAEKMFLLDSSDHRNYVMLSNIYSASGRWKDASKIRSMMKERRLVRNPGYSLIEHGNRVYQFVVGDQSHPDSDKIYAKLDEVLRKVCEAGLVRQTEFVLHDVEEDVKVDMINKHIEKLALAFGLLVTDNYMPITIIKNLRICGDCHSVMKLVSAIEKRTIIVRDPKRFHHFVNGICSCNDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST