Transcript Information: R_Transcript_169828.p1


Annotated TAIR IDAT3G11820.1
Annotated Gene Namesyntaxin of plants 121
Annotated Gene Symbol(s)SYP121, AT-SYR1, ATSYP121, SYR1, ATSYR1, PEN1
Annotation TypeOrtholog
Chromosome Positionchr3:3729540-3730868 | Reverse length=346
E-Value2.1E-140
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5509173188361
Replicate 22.5797502217977
Replicate 33.2053796636254
Condition 2: 8 Hour
Replicate 12.8413631679397
Replicate 23.4342651291923
Replicate 33.9029060378306
Condition 3: 24 Hour
Replicate 11.9588572719884
Replicate 21.505478422565
Replicate 32.1663598495564


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169828.p1 GENE.R_Transcript_169828~~R_Transcript_169828.p1 ORF type:5prime_partial len:293 (-),score=72.32,Syntaxin|PF00804.21|5.1e-71,Syntaxin|PF00804.21|3.3e+03,SNARE|PF05739.15|5.9e+03,SNARE|PF05739.15|2.3e+03,SNARE|PF05739.15|6.5e+03,SNARE|PF05739.15|5.4e-16 R_Transcript_169828:198-1076(-)
CTTCTGTCAAGCATTTTTTCCCGGTCACCGAGCAACTCAGGAGGTGACCTAGAGATGGGTTCAGACACTGGTGTAAACCTCGACAAGTTCTTTGAAGAAGTTGAGACCATCAAAGATGAGTTAAAGGAGTTAGAAGAGTTACAACGTAAGCTAAGAGCGGCCCATGAAGAGAGCAAAACGGCCCATACAGCAGCATCTGTTAAGGATCTCAGGGCCAGAATGGACTATGATGTGGCCCAAGCTTTGAAGAAGGCCAAGCTCATTAAGGTCCAGCTTGAGGCCCTGGACCAGTCCAACGATGCTAACAGGAGTTTACCGGGATGTGGGCCAGGCAGCGCTGCTGACCGGACTAGGACATCTGTGGTGGGTGGGTTGAGGAAGAAGCTGAAGGAGAAGATGGAGGGGTTTCAGGAGTTGAGAGAGAAGATTAATGGAGAGTATAGGGAGACAGTTGAGAGAAGGTATTTTACTGTTACTGGGGAGAATCCTGATGAGAAAACTGTTGATTTGTTGATTAGTACTGGTGAGAGTGAGAGTTTCTTGCAGAAGGCTATTCAACAACAGGGAAGGGGACAAATACTAGACACAATTGCCGAGATTCAAGAGAGGCATGACGCTGTCAGGGACATTGAAAGGAACCTGAGGGAACTACACCAGGTATTTCTTGACATGGCGGTTTTGGTTCAACATCAAGGGGAGCAGCTAGATGACATTGAAGCTCAAGTTAAGAGAGCAAGCTCTGTTACCAGGCAAGCAACAGTGGAATTAACTACAGCTAGAAAGCACCAGAAGAATACCAGAAAGTGGACGTGCTTTGCCGTAATTCTGCTCCTAATCATCATCTTAGTTGTTGTGCTCTCTGTGCGTCCATGGAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169828.p1 GENE.R_Transcript_169828~~R_Transcript_169828.p1 ORF type:5prime_partial len:293 (-),score=72.32,Syntaxin|PF00804.21|5.1e-71,Syntaxin|PF00804.21|3.3e+03,SNARE|PF05739.15|5.9e+03,SNARE|PF05739.15|2.3e+03,SNARE|PF05739.15|6.5e+03,SNARE|PF05739.15|5.4e-16 R_Transcript_169828:198-1076(-)
LLSSIFSRSPSNSGGDLEMGSDTGVNLDKFFEEVETIKDELKELEELQRKLRAAHEESKTAHTAASVKDLRARMDYDVAQALKKAKLIKVQLEALDQSNDANRSLPGCGPGSAADRTRTSVVGGLRKKLKEKMEGFQELREKINGEYRETVERRYFTVTGENPDEKTVDLLISTGESESFLQKAIQQQGRGQILDTIAEIQERHDAVRDIERNLRELHQVFLDMAVLVQHQGEQLDDIEAQVKRASSVTRQATVELTTARKHQKNTRKWTCFAVILLLIIILVVVLSVRPWK*

Click here to download the sequence:
Link to NCBI Protein BLAST