Transcript Information: R_Transcript_16992.p1


Annotated TAIR IDAT1G78570.1
Annotated Gene Namerhamnose biosynthesis 1
Annotated Gene Symbol(s)RHM1, ROL1, ATRHM1
Annotation TypeOrtholog
Chromosome Positionchr1:29550110-29552207 | Forward length=669
E-Value4.5E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2091783546572
Replicate 21.1025454556504
Replicate 33.2425062350718
Condition 2: 8 Hour
Replicate 12.5156710562238
Replicate 21.9910374242152
Replicate 34.1442033379879
Condition 3: 24 Hour
Replicate 17.1808666442819
Replicate 26.0425366823499
Replicate 35.0471647793987


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_16992.p1 GENE.R_Transcript_16992~~R_Transcript_16992.p1 ORF type:internal len:438 (+),score=75.14,GDP_Man_Dehyd|PF16363.1|1e-70,Epimerase|PF01370.17|8e-55,3Beta_HSD|PF01073.15|1.7e-24,Polysacc_synt_2|PF02719.11|2.6e-20,NAD_binding_4|PF07993.8|3e-19,RmlD_sub_bind|PF04321.13|4.4e-16 R_Transcript_16992:3-1313(+)
AAGCTCCCACCACCCTTCTCTCTTTCTTCTAACTATTATCTCGCAAATCTTCGTGGTTTGCTCTTCCCAATATTTTCTGTCGCAAATTTTATCATTCGCATCCCGATTTTCTCTCTCTTCTTTCTCCTATATTGTTTGCTCGATTTTTGTTCTGCCCTCTTATTCATCCTCGATCTGGGTTTTTCGCAGTTCATCTTAAGGTGTGTCATCATGTCTACATACACCCCAAAAAACATCCTCATTACTGGTGCCGGGGGATTCATTGCATCCCATGTCGCGAACCGGCTCATCAGGAGTTACCCGGAGTACAAGATTGTCGTGCTCGACAAGCTTGACTATTGCTCAAACCTGAAGAACCTGCGTCCCTCTCAATCGTCCCCAAACTTCAAATTTGTCAAGGGGGACATTGCTAGTGCCGATCTTGTGAACTACTTGCTTATCACTGAATCCATTGATACAATTATGCACTTTGCTGCTCAAACCCATGTTGATAATTCTTTTGGTAATAGCTTTGAGTTTACCAAGAACAACATTTATGGGACTCACGTCCTCCTAGAAGCCTGTAAGGTCACTGGTCAGATTCGGAGGTTTATCCATGTGAGTACTGATGAAGTCTATGGGGAGACAGATGAGGATGCCGTTGTCGGGAACCATGAGGCTTCGCAGCTTCTCCCAACAAACCCTTACTCTGCAACAAAAGCTGGTGCTGAAATGCTTGTAATGGCTTATGGCAGATCATACGGTTTGCCTGTCATTACAACCCGAGGTAACAATGTGTATGGACCTAATCAATTTCCCGAGAAATTGATCCCAAAGTTTATTCTTTTGGCCATGAGGGGAAAGCCTCTCCCAATTCATGGAGATGGAGCTAATGTGCGAAGCTATCTCTACTGTGAGGATGTTGCTGAGGCATTTGAGTGTATTCTCCACAAGGGAGAAGTTGGTCATGTGTACAACATTGGTACGAAGAAGGAAAGGAGAGTGATTGATGTTGCTCGGGACATATGCAAACTGTTCTCAATGGATCCTGAGGCCAGTATTAAGTTTGTTGAGAACCGGCCATTTAATGACCAGAGGTATTTCCTTGATGATCAGAAACTGAAAAACTTAGGATGGTCAGAGCGCACCACTTGGGAAGAGGGGCTGAAGAAGACAATGGAGTGGTATACCAGCAACCCTGATTGGTGGGGTGATGTCTCAGGAGCGTTGCTTCCACACCCTCGAATGTTGATGATGCCTGGTGGTATTGAGAGACATTTTGAAGAATCTGATGACAGCAAGTCTGGCTCTTCGGAGTTCCCCAACACTCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_16992.p1 GENE.R_Transcript_16992~~R_Transcript_16992.p1 ORF type:internal len:438 (+),score=75.14,GDP_Man_Dehyd|PF16363.1|1e-70,Epimerase|PF01370.17|8e-55,3Beta_HSD|PF01073.15|1.7e-24,Polysacc_synt_2|PF02719.11|2.6e-20,NAD_binding_4|PF07993.8|3e-19,RmlD_sub_bind|PF04321.13|4.4e-16 R_Transcript_16992:3-1313(+)
KLPPPFSLSSNYYLANLRGLLFPIFSVANFIIRIPIFSLFFLLYCLLDFCSALLFILDLGFSQFILRCVIMSTYTPKNILITGAGGFIASHVANRLIRSYPEYKIVVLDKLDYCSNLKNLRPSQSSPNFKFVKGDIASADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGKPLPIHGDGANVRSYLYCEDVAEAFECILHKGEVGHVYNIGTKKERRVIDVARDICKLFSMDPEASIKFVENRPFNDQRYFLDDQKLKNLGWSERTTWEEGLKKTMEWYTSNPDWWGDVSGALLPHPRMLMMPGGIERHFEESDDSKSGSSEFPNTQ

Click here to download the sequence:
Link to NCBI Protein BLAST