Transcript Information: R_Transcript_169948.p1


Annotated TAIR IDAT5G12010.1
Annotated Gene Nameunknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3877975-3879483 | Reverse length=502
E-Value9.8E-235
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.78390977124
Replicate 28.8716762322386
Replicate 312.121674019694
Condition 2: 8 Hour
Replicate 114.188992162589
Replicate 220.966138708234
Replicate 334.148402273766
Condition 3: 24 Hour
Replicate 122.680650601213
Replicate 217.972595273006
Replicate 323.076775162846


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169948.p1 GENE.R_Transcript_169948~~R_Transcript_169948.p1 ORF type:complete len:497 (+),score=127.47,DDE_Tnp_4|PF13359.2|4.5e-40 R_Transcript_169948:369-1859(+)
ATGAACAATACTAGCAGTAACAATCATCACAGTAATGGGGGTGGTGGTAGGAAAAGAAGGAAGAAAGATGATAATTGTGAGGAAAAGCAAGAACCCAATAAGGGTTTTAAAGAGATGATTACATCCTTCTTATTGTTAGAAGACCAAGAAAAGATTGATAAACAAGAGTGGGAAAAGATTGCCCACCAAGAAAGATCCAATTTGGAAGCCAACCATAAGAAGAAAACACAGGTTATGTTGGATTATTACTCCAGTGTGCAGGATTACTATGAGGATTTGAATGAAAGTGATAGAGCAAGGAGAAAGAGATCAAGGGCAGCTGTTAATTCTGTTGTTTCTGTTACTGCAGGTGCTGCTGAGATTTCTGACAAAAGCTGTAATCCTGATACTGCTAACAGTAAATCTTCTGGTGGTTCATCAGCTAATCATCAGAGAAGATTGTGGGTTAAAGATAGGTCTAAGGCATGGTGGGATGAGTGTAATAGTCCTGAATTTCCTGAGGAGGAGTTCAAGAAATGGTTTAGGATGGGGAAATCCACATTCGAGTCGATTTGTGATGAACTTAATTCAGTTGTTGCTAAGGAAGATACTATGTTAAGGGCTGCAATTCCTGTTAAACAAAGGGTAGCTGTGTGTATATATAGGTTAGCAACTGGTGAGCCACTTAGGTTAGTGTCTAAGAGATTTGGGTTGGGTATATCAACTTGTCATAAGCTTGTTCTTGAGGTTTGTGCTGCAATTAGGACTGTTTTGATGCCTAGATATTTGCAATGGCCAGATGAGGAATCAGCTAAGAGGATTAAGGAGGAGTTTGAGTCAGTTTCAGGGATTCCCAATGTAGTTGGTTCTATGTATACAACACATATACCTATTATTGCTCCTAAGATTAGTGTGGCTGCTTATTTCAATAAGCGCCATACCGAGAGAAATCAGAAAACGTCTTACTCGATTACAGTTCAAGGTGTGGTTGATCCTAAAGGGGTGTTCACTGATGTTTGTATCGGGTGGCCTGGTTCAATGCCTGATGATAAGGTGTTGGAGAAATCAGCATTGTATCAGAGGGGTGTTCAAGGCAATTTGAAGGGTGTTTGGATTGTTGGGAGTTCTGGTTATCCCTTAATGGATTGGGTTTTAGTGCCCTATACTAATCAGAATCTTACTTGGACACAACATGCTTTTAATGAGAAGATTGGGGAGATTCAGAAGGTTGGTAAGGATGCCTTTGCAAGGTTGAAAGGGAGATGGTGTTGCTTGCAAAAGCGAACCGAGGTGAAACTTCAGGAATTGCCTGTAGTTCTTGGTGCTTGCTGTGTTCTACATAATATATGTGAAATTAGAGGGGAAGAGATGGATCCTGGGCTGAATTTTGATCTCTTTGATGATGAGATGATCCCAGAGATTCCTTTGCAATCTATAAGCTCTCTAAAGACTAGAGATGCAATTGCCCATAATCTTTTGCATCATGGCCTTGCTGGCACTGGTTTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169948.p1 GENE.R_Transcript_169948~~R_Transcript_169948.p1 ORF type:complete len:497 (+),score=127.47,DDE_Tnp_4|PF13359.2|4.5e-40 R_Transcript_169948:369-1859(+)
MNNTSSNNHHSNGGGGRKRRKKDDNCEEKQEPNKGFKEMITSFLLLEDQEKIDKQEWEKIAHQERSNLEANHKKKTQVMLDYYSSVQDYYEDLNESDRARRKRSRAAVNSVVSVTAGAAEISDKSCNPDTANSKSSGGSSANHQRRLWVKDRSKAWWDECNSPEFPEEEFKKWFRMGKSTFESICDELNSVVAKEDTMLRAAIPVKQRVAVCIYRLATGEPLRLVSKRFGLGISTCHKLVLEVCAAIRTVLMPRYLQWPDEESAKRIKEEFESVSGIPNVVGSMYTTHIPIIAPKISVAAYFNKRHTERNQKTSYSITVQGVVDPKGVFTDVCIGWPGSMPDDKVLEKSALYQRGVQGNLKGVWIVGSSGYPLMDWVLVPYTNQNLTWTQHAFNEKIGEIQKVGKDAFARLKGRWCCLQKRTEVKLQELPVVLGACCVLHNICEIRGEEMDPGLNFDLFDDEMIPEIPLQSISSLKTRDAIAHNLLHHGLAGTGFL*

Click here to download the sequence:
Link to NCBI Protein BLAST