Transcript Information: R_Transcript_169981.p1


Annotated TAIR IDAT1G32540.1
Annotated Gene Namelsd one like 1
Annotated Gene Symbol(s)LOL1
Annotation TypeOrtholog
Chromosome Positionchr1:11768253-11769591 | Forward length=187
E-Value3.4E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5247097016009
Replicate 22.4616352212212
Replicate 33.7914600159149
Condition 2: 8 Hour
Replicate 15.066041023568
Replicate 23.3926855207316
Replicate 33.7555056455973
Condition 3: 24 Hour
Replicate 12.3749455752797
Replicate 21.2168418698249
Replicate 31.5094968749584


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_169981.p1 GENE.R_Transcript_169981~~R_Transcript_169981.p1 ORF type:complete len:145 (+),score=23.02,zf-LSD1|PF06943.8|5.4e-11,zf-LSD1|PF06943.8|7.4e-12,zf-LSD1|PF06943.8|9.8e-13 R_Transcript_169981:31-465(+)
ATGCCAGTTCCTCTTGCTCCATATCCAACACCTCCAGTACCTTTCACCCAACCACCTGCTAATGGGGCACAAAGCCAATTAGTATGCTCAGGCTGTAGAAACCTTCTACTTTATCCCGCTGGAGCTACTTCTGTTTGTTGTGCTGTTTGCAATGCTGTCACTGCTGTCCCTGCTCCAGGGACGGAAATGGCGCAGTTGGTGTGTGCCGGATGCCACACCCTTCTAATGTACATCCGAGGAGCAACCAGTGTACAATGTTCTTGTTGTCACACCATTAATCTGGCTTTGGAAGCAAATCAAGTGGCACATGTGAATTGTGGGAATTGCAGGATGTTGTTGATGTATCAGTACGGGGCAAGGTCTGTCAAGTGTGCGGTTTGCAATTTTGTCACTTCAGTTGGGGCTTCAACCAGCACAGCAGATACAAAAATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_169981.p1 GENE.R_Transcript_169981~~R_Transcript_169981.p1 ORF type:complete len:145 (+),score=23.02,zf-LSD1|PF06943.8|5.4e-11,zf-LSD1|PF06943.8|7.4e-12,zf-LSD1|PF06943.8|9.8e-13 R_Transcript_169981:31-465(+)
MPVPLAPYPTPPVPFTQPPANGAQSQLVCSGCRNLLLYPAGATSVCCAVCNAVTAVPAPGTEMAQLVCAGCHTLLMYIRGATSVQCSCCHTINLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGASTSTADTKI*

Click here to download the sequence:
Link to NCBI Protein BLAST