Transcript Information: R_Transcript_170104.p1


Annotated TAIR IDAT1G32120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11552926-11558608 | Forward length=1206
E-Value5E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3323329164028
Replicate 20.39846993490785
Replicate 30.90289330670966
Condition 2: 8 Hour
Replicate 11.2153568003012
Replicate 20.94666507064873
Replicate 31.1394441703309
Condition 3: 24 Hour
Replicate 11.6422373053394
Replicate 20.67614662292281
Replicate 31.1503027280705


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170104.p1 GENE.R_Transcript_170104~~R_Transcript_170104.p1 ORF type:complete len:685 (+),score=131.87,PMD|PF10536.5|6e-102 R_Transcript_170104:132-2057(+)
ATGGTGATCTCATCACAAGAGATCCTTATAGAAGAGAGAAAAGAGCTAATGGTCTCTCCTTGTGGTGGAAAAGCCTTTTGGAAGGTTGCCCATTTCCTTAAACCCTCATTTCCTGATCCTCAGAAGACCAACATTCCAAAACCCTCTTCAAACCTTCAAAACCCATCACCCCAAGTTGAAATCTTTCACTTCAAAAGTGAAATTTCATGGCTGGAGAAATCCATTACAGAACTGGGCTACTTGGATAAAAAATCGCAACCCTTATTTGAAACCATTTGGAAGAAAGCCTCAATCTTTGACCCCATAATGGCTTCAACCCTTGAAATTCCTAAGTACCATGATACTATATTTGCTCTTGCACAAAGATGGTGCCCAGAAACTAACACTTTTGTGTTTCCTTGGGGTGAAGCAACTATTACTTTAGAGGATGTTATGGTTTTAGGGGGGTTTTCTGTTACAGGGGACTCTGTTTTGAGTGAATTATGTAGCACAGAACAGTGTAGAATTGAGGATTCTTTGTGTAGGGAAAGGTCCAAGTTATTCAAGTCGAAATCGAGGAATGCATTGCAGCAAAAATGGATGGATGTTTGGATGAAAAACGAGAGCGAATTCGAGCATGAAGCTTTTTTATCCTGTTGGCTGTCAAGGTGTGTCTTGCCTGTTGGTTCTGTTAATACTATTATCAATAAGGATGTTTTCCCTATTGCAATTCTTTTAGCTCAGGGAATTAAGATTGCATTAGCACCTGCTGTTTTAGCTGGCATTTATAGAGATTTAAGGTTGTTGAAACAAATGATTGATACTTTAGAAAGTGATCAAGATGTAACAAAACTTGTTCTAAGGGCACCTTTGCAATTGTTACAGGTTTGGTTTTGGGAGAGGTTTCCTTTACTTAGCCCAAAGCCGAACCCTATTATTAATGAACTACCTAGATTAGCAATGTGGCATAAAGTGAAAATTCTGAAGATTTCTAAGCTGGGTTCTGCCATTGATTCTTCGAAAGAGGAGTTTCGTTGGAGGCCTTATTGTACAGCCTTGAATAACTGGTCAGTTGGTGTTAATCTCTACCCCGAAGAGGATGGATGGTTATCAGTTGATACTGGTCCTCATCTTGATTTAGTATCATATGTTAGATGTATAAGGGTCAGTGAACTTGTTGGATTGGATTGTGTTGAGCAATATCAACCTCATCGAGTCTCAATGCAGTTCGGGCTTGATCAAGACATCCCTGTGGATATTCCTGAGCTAAATAGTAGTCATGAGATTGCTTGGGAGAATTATGGTAGGCCAACTTTTAACAATACTGTGAAGTTATATATGCCATCAAGGCTCACTGAATCAGATGTTACAACACGTTACTTGGAGTGGTGGCAGAAGCCAAGCTTTGTGGTGGCAGAAAGGGAGAGGATTAAAACGGAAAATAATGAACCTGATGTTCCACCTGGTTATGCTCCCAAAAGGATTGCAGTAGTGGATATTTCCTCGGATCAATCCAGCTCAAAGAGGTCTAAAACATCTTCTGGTAGTCCTAGCTTTAGTACGTCAAGCACTGAGGTTGATGCTACTCCAAGTTCTCCTCATATCAGCAGGATGGAAAGTGGAGGTTATTCTGATGATTGCGATCACTTGACATTGAAGGATTTGTTTCGGCTTGGGTCTACTAGTAAGGATGACAAGAATGGAACCTTCTCATCAATTAATTCAGAAAGTCCATGTGACGGTATAAGGAGAGTATCCAATTTGAATGATGAAATTGAGAAAGAAGTTTCGAGTCCAATCACAAGCACCCACGAGAAACAAGCTGGAACAAGTTGCTCTGTTACTCCTGAGTTCGCAGGAAAAATTGATCTTGCAGACCGGATTGGTAGGTTACGGATAATTGTCGACTTTATAAAAGCAACAACATCAGCCAACTCTGGAGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170104.p1 GENE.R_Transcript_170104~~R_Transcript_170104.p1 ORF type:complete len:685 (+),score=131.87,PMD|PF10536.5|6e-102 R_Transcript_170104:132-2057(+)
MVISSQEILIEERKELMVSPCGGKAFWKVAHFLKPSFPDPQKTNIPKPSSNLQNPSPQVEIFHFKSEISWLEKSITELGYLDKKSQPLFETIWKKASIFDPIMASTLEIPKYHDTIFALAQRWCPETNTFVFPWGEATITLEDVMVLGGFSVTGDSVLSELCSTEQCRIEDSLCRERSKLFKSKSRNALQQKWMDVWMKNESEFEHEAFLSCWLSRCVLPVGSVNTIINKDVFPIAILLAQGIKIALAPAVLAGIYRDLRLLKQMIDTLESDQDVTKLVLRAPLQLLQVWFWERFPLLSPKPNPIINELPRLAMWHKVKILKISKLGSAIDSSKEEFRWRPYCTALNNWSVGVNLYPEEDGWLSVDTGPHLDLVSYVRCIRVSELVGLDCVEQYQPHRVSMQFGLDQDIPVDIPELNSSHEIAWENYGRPTFNNTVKLYMPSRLTESDVTTRYLEWWQKPSFVVAERERIKTENNEPDVPPGYAPKRIAVVDISSDQSSSKRSKTSSGSPSFSTSSTEVDATPSSPHISRMESGGYSDDCDHLTLKDLFRLGSTSKDDKNGTFSSINSESPCDGIRRVSNLNDEIEKEVSSPITSTHEKQAGTSCSVTPEFAGKIDLADRIGRLRIIVDFIKATTSANSGD*

Click here to download the sequence:
Link to NCBI Protein BLAST