Transcript Information: R_Transcript_170130.p1


Annotated TAIR IDAT1G32050.1
Annotated Gene NameSCAMP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11528616-11530974 | Forward length=264
E-Value2.1E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 151.891559495791
Replicate 241.992600832596
Replicate 347.042189086351
Condition 2: 8 Hour
Replicate 136.30662733557
Replicate 236.325723757328
Replicate 340.476005291438
Condition 3: 24 Hour
Replicate 153.920060653573
Replicate 252.391802728574
Replicate 356.522271873444


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170130.p1 GENE.R_Transcript_170130~~R_Transcript_170130.p1 ORF type:complete len:261 (+),score=46.27,SCAMP|PF04144.9|1.2e-56 R_Transcript_170130:289-1071(+)
ATGAGTTCAAATCAAATCCAAGAAGAAAATGTCAATCCATTCGCTAATGGTTCTAGTGTGACTGGCTCGAAGTTCCGCCTCCCATCCTTCGGTTTTGGTCAGAAACATGATGCCACTGACGACATACCATTGGATGCAATGAATGATTCCAAAAAGAGAGAGAAAGAAATTGTTGATTGGGAAGCAGATCTGAAAAGGAGAGAATTGGACATAAAGCGGAGAGAAGATGCTGTTTCAAGAGCTGGTGTTCCTACTGAAGATAAAAATTGGCCACCCTTCTTCCCAATCATACACCATGATATTGCCAATGAAATACCTGTTCCTGCTCAGAAGTTGCAGTATTTGGCATTTGCCAGTTGGTTAGGTCTAGTTCTTTGTCTTGTCTTCAATGTAGTTGCAGTGATTGTCTGTTGGGTCAGGGGAGGAGGTGCCAAAATCTTTTTTCTTGCAATAATATATGCTTTACTTGGTGTTCCCCTGTCATATGTGCTGTGGTACCGACCACTTTATCGTGCAATGAGAACGGATAGCGCCTTCAAATTTGGTTGGTTTTTCATGTTTTACCTGCTCCATATTGCCTTTTGTGTTTTTGCTGCAATTGCTCCACCAATTGTGTTTCACGGGAAGTCTCTCACGGGTATCCTTGCAGCAATTGACTTGTTTAATGGTCATGCGTTTGTTGCGATTTTCTACTTAGTTGGCTTTGGCTTGTTTTGCTTAGAATCACTCCTGAGCTTGTGGGTTCTTCAGAAAATATATACATTTATCCGAGGGCGCAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170130.p1 GENE.R_Transcript_170130~~R_Transcript_170130.p1 ORF type:complete len:261 (+),score=46.27,SCAMP|PF04144.9|1.2e-56 R_Transcript_170130:289-1071(+)
MSSNQIQEENVNPFANGSSVTGSKFRLPSFGFGQKHDATDDIPLDAMNDSKKREKEIVDWEADLKRRELDIKRREDAVSRAGVPTEDKNWPPFFPIIHHDIANEIPVPAQKLQYLAFASWLGLVLCLVFNVVAVIVCWVRGGGAKIFFLAIIYALLGVPLSYVLWYRPLYRAMRTDSAFKFGWFFMFYLLHIAFCVFAAIAPPIVFHGKSLTGILAAIDLFNGHAFVAIFYLVGFGLFCLESLLSLWVLQKIYTFIRGRR*

Click here to download the sequence:
Link to NCBI Protein BLAST