Transcript Information: R_Transcript_170161.p1


Annotated TAIR IDAT4G12540.1
Annotated Gene Nameunknown protein; Has 29 Blast hits to 26 proteins in 11 species: Archae - 2; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7429876-7431602 | Reverse length=461
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0563097412552
Replicate 21.4648581685789
Replicate 32.13085931127
Condition 2: 8 Hour
Replicate 11.5944284151695
Replicate 22.1840861333251
Replicate 32.7016350690808
Condition 3: 24 Hour
Replicate 11.9220489772031
Replicate 23.6929735816781
Replicate 33.1559016060177


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170161.p1 GENE.R_Transcript_170161~~R_Transcript_170161.p1 ORF type:3prime_partial len:215 (-),score=43.68 R_Transcript_170161:1-564(-)
ATGGATGAAGCTGCTGCCATAAAAGTGGAGATCACATCAGATTTGGGCTTTGCTTCTCCTTTGAAGATTCCGTTTGGAGACTACACCACGGTTTTGACAACCCCGTGTTTAAAAGCTCCTCCGACGTCTTGTGCATTGCTCAAGCCTGATTGTGATGGGAAGATAAACAAATTACGGATGTCAACTCCATTTCCAGTAGGAAACAAAAACTTGTGTGAGTCAACTGAGTCTGAGAGCTCTAGTGGTGAAGTCTCAGAGAAATTAGGTCTCAAGTATCCTGAAATTGTTGGAATTAAGTCCTCTATGCTTAGAAATGGAAGCAAAGCACTAGAAGCATCACCAGCGTGGATAATGTCACCACCTAAATGTTGTACTTTGCTGGAGCCTCCTAGCGATAAACCTATAATGGAAGTGCAAGATTTAGCTGATAAATTCAATAAGCAAATTTGCCTCGATCCTCCAAAGGAAAGCAGCATCCATACTAAAGATCAAGAGCAGCAAAACAAGGAAGTTTGCAGTCAAGGTATCTGCCAAATAGTTCGAGATTTTCCCTTCTGTTTTTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170161.p1 GENE.R_Transcript_170161~~R_Transcript_170161.p1 ORF type:3prime_partial len:215 (-),score=43.68 R_Transcript_170161:1-564(-)
MDEAAAIKVEITSDLGFASPLKIPFGDYTTVLTTPCLKAPPTSCALLKPDCDGKINKLRMSTPFPVGNKNLCESTESESSSGEVSEKLGLKYPEIVGIKSSMLRNGSKALEASPAWIMSPPKCCTLLEPPSDKPIMEVQDLADKFNKQICLDPPKESSIHTKDQEQQNKEVCSQGICQIVRDFPFCFS

Click here to download the sequence:
Link to NCBI Protein BLAST