Transcript Information: R_Transcript_170174.p1


Annotated TAIR IDAT5G38890.1
Annotated Gene NameNucleic acid-binding, OB-fold-like protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15569507-15570898 | Forward length=191
E-Value1E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0004867322825
Replicate 22.6844585007139
Replicate 32.4057304324726
Condition 2: 8 Hour
Replicate 13.3542280749651
Replicate 24.4925972648957
Replicate 33.5640148706696
Condition 3: 24 Hour
Replicate 14.8221878195178
Replicate 23.8269398988216
Replicate 33.5979788526407


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170174.p1 GENE.R_Transcript_170174~~R_Transcript_170174.p1 ORF type:5prime_partial len:219 (+),score=17.81,EXOSC1|PF10447.5|0.15,EXOSC1|PF10447.5|5e-12,ECR1_N|PF14382.2|1.8e-08 R_Transcript_170174:3-659(+)
TCAAGATCGATAATGGGCCGGATCCGGTCCACCAATAATTTTATTTTGCGACACCTACCGCCACATTCAAGACTCAAGAGCGCCAAAGGCTTTCACCTCTTCCTCTACTACTACTTGAACGGCGAACTGATTTTCCGCGTCCCGCCGCTTCAACGCCGCCAACTTCCGGCGAACACTCACCACTTTTCATCACATAAAGAGAGAAAAATGGGAGAGAAAATCGAGGAGGAGAGAGAGATAGTTACGCCGGGAGAAATACTCGGAAAAGCGTCGGAGCTTAAACCCGGCAAAGGCGCCCATGTGGCACCTGACGCTAGCGGTATTTCCTACGTTTACGCTTCTCTCACTGGTCACCGTTCCCTCTTGCCTCCTCCTTCTGATTCCCCTGATCAGAGGCCAGTCGTGGAAATAACCGGTCACAAAGCGCATGGTCCAGTTCCTGAGCCTGGTTCTACTGTTCTTGCCCGTGTTAAAAAGGTGATGGCTAAAATGGCTTCTGCGGACATCATGTGTGTTGGTGGAAAGTCTGTCAGAGAAAAATTCTCAGGTATTATCAGGCAACAGGATGTAAGAGCAACAGAGATTGACAAAGTCGATATGTATGCATCATTTCGACCTGGTGATATTGTCAGGGCTGTAGTCGTATCCTTTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170174.p1 GENE.R_Transcript_170174~~R_Transcript_170174.p1 ORF type:5prime_partial len:219 (+),score=17.81,EXOSC1|PF10447.5|0.15,EXOSC1|PF10447.5|5e-12,ECR1_N|PF14382.2|1.8e-08 R_Transcript_170174:3-659(+)
SRSIMGRIRSTNNFILRHLPPHSRLKSAKGFHLFLYYYLNGELIFRVPPLQRRQLPANTHHFSSHKERKMGEKIEEEREIVTPGEILGKASELKPGKGAHVAPDASGISYVYASLTGHRSLLPPPSDSPDQRPVVEITGHKAHGPVPEPGSTVLARVKKVMAKMASADIMCVGGKSVREKFSGIIRQQDVRATEIDKVDMYASFRPGDIVRAVVVSFM*

Click here to download the sequence:
Link to NCBI Protein BLAST