Transcript Information: R_Transcript_170179.p2


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.027365758552802
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.027213809026067
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170179.p2 GENE.R_Transcript_170179~~R_Transcript_170179.p2 ORF type:complete len:667 (-),score=130.96,Retrotrans_gag|PF03732.13|1.2e+02,Retrotrans_gag|PF03732.13|7.8e-12 R_Transcript_170179:1296-3296(-)
ATGGGACATTCTCTGCCTCTCATCTCTTTCTCCGTGGAATCTTCAGCAAATCTCTTTCTGAGAAAATCAATGGCCCCAAGGAATAGCACTTCTCGTGGCTCCAAGGCTGGATCTGCTGCCCAAAGGTCAAAAATTACTCGCGCTGTTTCTTCAAGCAACGCATCAACAAACATGGTCACAAGGAAGATGGGAAAGGCCATCGCCACCACTTCCTGCCCACAAATTGAGCGATCTTCTGCAAAATCGCTTGAAAACCCTAAGTTCGGCCCCAAATCTCCAGCCGAATTGAAGGGAACGGCTTCAAAGATTTTGAAGCAACATAAAGATGTTGATACGGAGGAAAACCTTGACCATATCAACCCCACTTCTGCACCAAGTTTTCTTGTGGAAGATGGGTTCACCAGTGAGGATTCTGTTGAAATCTCATCTAATGAGTATGAACTGCCTCATGAAACAAAACAATCTACAGATCAAGTCCTCGCTTCTGTCATGATGGTGGAAGCCGGATCTGTGGAAGAGCAACTCGCTGACATGAAGAAGCTCCTCGACAAATTCCAAAAAGATAGCGAGGAAAAGGACGCTCAAATCAAGCGTCAAAACAAACAAATTGCACTCTTGACCAAGAAATTGGGCAAGAAAAAGGTAGGTGAGTCTTTCGACAAGGAAGATAGTAGTAGTGAAGACAGTAGCAGTGAAACTTCTGTCGACTCTAATCACAACTCAAGCAAGAAAGGGGGCAACTCTTCTAGCACCATCAACGTCCAGGACATCCAGGACATGATTGCTAATGCCCTCAAGCTTCACATGGGTGGGGGCGCTCAAGTCTCTCACCACTATACCAAACCCTACACGAAGAGAATTGATGCCATGCGCACTCCCTTCGGATACCAACCGCCAAAATTCCAGCAATTTGACGGTAAGGGCAATCCCAAACAGCACGTCGCTCACTTCATTGAGACGTGCAACACCGCTGGAACTGAAGGCGACTTACTGGTGAAGCAGTTTGTTCGCTCACTCAAAGGCATTGCCTTTGATTGGTACACAGATCTCACTCCAGAATCCATTGATAGTTGGGAACAAATGGAGGGAGAATTTCTCAACAGATTCTATAGCACCCGCCGTACCGTCAGCATGACTGAGCTGACAAACACAAAACAATGGAAAGATGAACCTGTCATCGACTACATCAACCGTTGGCGTGCGTTGTGTTTGGAATGCAAAGACCGCCTCACTGAAGTTTCTGCGGTCGAGATGTGCATCCAAGGTATGCATTGGAGCTTGGTTTACATCTTGCAAGGGATCAAGCCCCGAACCTTCCAAGACTTGGCGACAAAGGCTCATGACATGGAGCTCACGATCGCCAATCATGGTGCAAAGTTCTTACCCACTCCGGAACCGAGGAACGAAAAGAAAGAGTTCCGAAAGAATGACAGGTCCTCCAAAGGGACCAAGGAGTCCATGAACATCACCTCGGCTCCTATCAAAATCTCGGCAAAGCTGAAATCTAAAGCAGAGAAGGCTCCAATTTCCAAGAACTTTGAGAGGAAGAAGCCTACAGTCAAGGAGCTTCAGGCCAAGAAGTATCCTTTTCCTGACTCTGATCTATCGGGAATGTTGGACGACTTGCTCGATAAGGGAGTAATTGAATTGCCTCCATCAAAGCGTCCTGAAGAGGCTGGAAGGACTACTGACCCAAACTTCTGTCGGTATCACAGAGTTGTCAGCCACCCCATTGAAAAGTGCATAACGTTAAAAGAAAAGATTATGCAACTCGCCAAAGATGGGCATATCCTCTTGGATGTGGATGAAACTGTGGAGTCCAACCATGCTGTTGCAGTATTTGGGCCTGCTGATTCATGTCAGCAACTTGAAGAAAAGGAGTTGGCGTGCCCTAGTCACCAAGTGAAGCAAGGGTGTTTAATACAATTTGGCACTTTAGAGCCAGTTGTTGTTGAAATTCCAAGTCAGCTTGCAAAGGTTCAGCCTGTCACAGCTATCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170179.p2 GENE.R_Transcript_170179~~R_Transcript_170179.p2 ORF type:complete len:667 (-),score=130.96,Retrotrans_gag|PF03732.13|1.2e+02,Retrotrans_gag|PF03732.13|7.8e-12 R_Transcript_170179:1296-3296(-)
MGHSLPLISFSVESSANLFLRKSMAPRNSTSRGSKAGSAAQRSKITRAVSSSNASTNMVTRKMGKAIATTSCPQIERSSAKSLENPKFGPKSPAELKGTASKILKQHKDVDTEENLDHINPTSAPSFLVEDGFTSEDSVEISSNEYELPHETKQSTDQVLASVMMVEAGSVEEQLADMKKLLDKFQKDSEEKDAQIKRQNKQIALLTKKLGKKKVGESFDKEDSSSEDSSSETSVDSNHNSSKKGGNSSSTINVQDIQDMIANALKLHMGGGAQVSHHYTKPYTKRIDAMRTPFGYQPPKFQQFDGKGNPKQHVAHFIETCNTAGTEGDLLVKQFVRSLKGIAFDWYTDLTPESIDSWEQMEGEFLNRFYSTRRTVSMTELTNTKQWKDEPVIDYINRWRALCLECKDRLTEVSAVEMCIQGMHWSLVYILQGIKPRTFQDLATKAHDMELTIANHGAKFLPTPEPRNEKKEFRKNDRSSKGTKESMNITSAPIKISAKLKSKAEKAPISKNFERKKPTVKELQAKKYPFPDSDLSGMLDDLLDKGVIELPPSKRPEEAGRTTDPNFCRYHRVVSHPIEKCITLKEKIMQLAKDGHILLDVDETVESNHAVAVFGPADSCQQLEEKELACPSHQVKQGCLIQFGTLEPVVVEIPSQLAKVQPVTAI*

Click here to download the sequence:
Link to NCBI Protein BLAST