Transcript Information: R_Transcript_170179.p3


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.35198547295601
Replicate 20.23136419191513
Replicate 30.18931188095994
Condition 2: 8 Hour
Replicate 10.40472504045033
Replicate 20.61600225457811
Replicate 30.60005324364916
Condition 3: 24 Hour
Replicate 10.69569112811225
Replicate 20.42530802268331
Replicate 30.48237365701151


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170179.p3 GENE.R_Transcript_170179~~R_Transcript_170179.p3 ORF type:complete len:363 (+),score=73.78,Retrotrans_gag|PF03732.13|1.1e+04,Retrotrans_gag|PF03732.13|38,Retrotrans_gag|PF03732.13|0.0002 R_Transcript_170179:3746-4834(+)
ATGGCCTCAAGGAACAGCACTTCTCGTGGCTCCAAGGCTGGATCTGCTGCCCAAAGGTCAAAAATTACTCGCGCTGTTTCTTCAAGCAACGCATCAACAAACATGGTCATAAGGAAGATGGGAAAGGCCATCGCCACCACTTCCTGCCCACAAATTGAGCGATCTTATGCAAAATCGCTTGAAAACCCTAAATTCGGCCCCAAATCTCCAGCCGAATTGAAGGGAACGGCTTCAAAGATTTTGAAGCAACATAAAGATGTTGATACGGAGGAAAACCTTGACCATATCAACCCCACTTCTGCACCAAGTTTTCTTGTGGAAGATGGATTCTCCAGTGAGGATTCTGTTGAAATCTCATCTCATGAGGATGAACTGCCTCATGAAACAAAACAATCTACAAATCAAGTCCTCGCTTCTGTCATGATGGTGGAAGCCGGATCTGTGGAAGAGCAACTCGCTGACATGAAGAAGCTTCTCGACAAATTCCAAAAAGATAGCGAGGAAAAGGACGCTCAAATTAAGCGTCAAAACAAACAAATTGCACTCCTGACCAAGAAATTGGGCAAGAAAAAGGTAGGCGAGTTTTCCGACAAGGAAGATAGTAGTAGTGAAGACAGTAGCAGTGAAACCTCTGTCTATTCTAAGCCCAACTCAAGCAAGAAAGAGGGCAATCCTGCTAGCACCATCAACATGCAAGACATCCAGGATATGATTGCAAGTGCCCTCAAGCTTCACATAGGCGGAGGCCCTCAAGTCTCTCACCGCTACACTAAACCCTACACGAAGAGGATTGACGCCATGCGCACTCCCTTCGGATATCAACCGCCAAAATTCCAGCAATTTGACGGTAAGGGTAACCCCAAGCAGCATGTTGCTCACTTCACTGAGACGTGCAACACTGCTGGAACTGAAGGTGACTTACTGGTGAAGCAGTTTGTTCGCTCACTCAAAGGCATTGCCTTTGATTGGTACACAGATCTCACTCCAGAATCCATTGATAATTGGGAACAAATGGAGGGAGAATTTCTCAACAGATTCTATAGCACCCGACGTACCGTCAGCATGACTGAGCTGACAAACACAAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170179.p3 GENE.R_Transcript_170179~~R_Transcript_170179.p3 ORF type:complete len:363 (+),score=73.78,Retrotrans_gag|PF03732.13|1.1e+04,Retrotrans_gag|PF03732.13|38,Retrotrans_gag|PF03732.13|0.0002 R_Transcript_170179:3746-4834(+)
MASRNSTSRGSKAGSAAQRSKITRAVSSSNASTNMVIRKMGKAIATTSCPQIERSYAKSLENPKFGPKSPAELKGTASKILKQHKDVDTEENLDHINPTSAPSFLVEDGFSSEDSVEISSHEDELPHETKQSTNQVLASVMMVEAGSVEEQLADMKKLLDKFQKDSEEKDAQIKRQNKQIALLTKKLGKKKVGEFSDKEDSSSEDSSSETSVYSKPNSSKKEGNPASTINMQDIQDMIASALKLHIGGGPQVSHRYTKPYTKRIDAMRTPFGYQPPKFQQFDGKGNPKQHVAHFTETCNTAGTEGDLLVKQFVRSLKGIAFDWYTDLTPESIDNWEQMEGEFLNRFYSTRRTVSMTELTNTK*

Click here to download the sequence:
Link to NCBI Protein BLAST