Transcript Information: R_Transcript_170180.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52497454073306
Replicate 20.57290790221462
Replicate 30.54057197867026
Condition 2: 8 Hour
Replicate 10.61395236593388
Replicate 20.8410066179207
Replicate 30.60237645864116
Condition 3: 24 Hour
Replicate 10.55870769801935
Replicate 20.86204182979395
Replicate 30.93619975799413


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170180.p1 GENE.R_Transcript_170180~~R_Transcript_170180.p1 ORF type:complete len:1356 (+),score=266.81,RVT_1|PF00078.23|7.2e-26 R_Transcript_170180:5285-9352(+)
ATGTTGGACGACTTGCTCGATAAGGGAGTAATTGAATTGCCTCTATCAAAGCGTCCTGAAGAGGCTGGAAGGACTACTGACCCAAACTTCTGTCGGTATCACAGAGTTGTCAGCCACCCCATTGAAAAGTGCATAACGTTAAAAGAAAAGATTATGCAACTCGCCAAAGATGGGCATATCCTCTTGGATGTGGATGAAACTGTGGAGTCCAACCATGCTGCTGCAGTATTTGGGCCTGCTGATTCATGTCAGCAACTTGCGGAGAAGGAGTTGGCGTGCCCTAGTCACCAAGTGAAGCAAGGGTGTTTAATACAATTTGGCACTTTAGAGCCAGTTGTTGTTGAAATTCCAAGTCAGCTTGCAAAGGTTCAGCCTGTCGCAGCTATCCAATCTATCCAGAAGGATGATGATGATGATGAAGGATGGACTCTTGTAACTAGAAGGAGACCAAGAAGGCAACCACGACCTCAACCACTTCCACCCCGACGTAGGAAGCAACAAGGGAGGAAGAACAATCCTCGCCGCTCAAAGGGGAAGAAGAAAGCAAAGATAAGCAAAAGGTCGGAGGTCTTGCCAATTGATCTGCTAGAGCAAGAACCTCCTGTTCCTGTAACCCTAGGAGATTATTTCCCGCAGGACTTCTTCGATGTTGTCACCGTCAACATGGTTAGTTGCTCCGAAGAGGGTGAGGAAGAAGAAGAAAAGGAGAATGATGGAGAACAAATATCTCCAGAGAAGTCATCCTACCAACTCAGCCCTGATGCGAAAGTTTTGGCAGTTTTGGATGCACTTCCCTCAAAAATGGATTGGAAACAGGCTTTTCACCTACCTGGGGAGACGCGCCAACAAGTAGCTCTTGCCTTGAACCATCCCGAGCTCTACGCCGACAAGATAGGCAATCCAGAAGAGTTTGTAGAGGCTACCTCTAAATGTGTTTCTTGCAACACCGCATTGGCGTTCACCGATGAGGATTTGCTTCTTGGTTCCAAGCCTCACAATAGACCCTTGTTCATATCTGGCTATATCCGGGAACAAAAAGTCCGTCGCATATTGGTTGATGGGGGCTCTGCTGTCAACATTATGCCAAAGTCGACAATGATGGAGTGTGGAATCAAAATGGAAGAACTGGCCAGGAGTTCGACGGTGATCCACGGCTTCAACATGGGTAGTCAGCGTGCAATTGGCATGATACGTGTGACTCTTTCTATGGGAGATTTATCTTCAGCGGCGTTGTTTCATGTGATAGACTCGAAGACCTCCTTCAAGCTGCTCCTTGGGCGTCCTTGGCTTCATGAAAATGGGATTGTGGCATCAACCCTTCATCAATGCCTCAAATACTATCGGGATGGTGAGAGAAAAATCAACGGTGATGTTAAGCCCTTCACCAAGGCGGAAGCACACTTTGCGGATGCAAAGTTCTTTGAGGAGATGGGGACAAGTGAGACATTGCCCAAAATGATTCCATCGACTGGAAAGGGAAGAGCAATGATAGAAAAGTCTAACCCATTGCCTTCCAAAATCATTCCCGTCTCCTGTAAAGCTGAAGGATCACAAGCAAAGGAAGGGAGTACAGAGGAAGTACAAGATCCTCCAACTAAGAAGTTAGGCTCCACAGCTCCTTCTTCATCTCCAATTTTGCGATACATCCCCAAATCTCATCGCAAAGATGGAGAGTCACCCTTCAAAGAGTGCTCGACACAAAAATGGATGCCTAAGGAGCTCAAGAAGGTAGATGAAGCAAGTATCCAAGCCTTGAAAAGCCAAGTAATCATCCCAGCTGCTATGACTAGCCTACCTCCCTCAAGCTTGCCCCCACTCACTGAGTTTATCCCTTCTACTACAAAGTTGCTGAAAGAAGAAGGGAAATCATCATGTGGGAACGCGACAGGAAACTTTGACTCAAAGGCCTACAAACTATTAGCAAGATCTGGCTATGATTTTAGTAACCCAACTCCAATGGGTAAAGTCATCGAAGTGAAGCAATATGGCTTGAATGATACACAAAAGAAACTCCAGGAACAAGGAGGGGATGTCCGAGCATCAAAGCTAGGGTTAGGATACATACCTCCCAAACCTATAAAGATTTTCGCTCGACGCAAGGAAGTGCCATCTGCAATCCAACACATCACTGCCGAGGAAGTGTCAGAGAATGATGATGAGAAAGACATCCATACTCAAAAGGTGTCCGTGTTTGATAGACTTCGTCCAAGTTTGACCAAAAGGACGTCAGTATTCAATAGAATCCGTGAGCATTCAAGTTCCATGACAAAGAATGCTCCCTCAAATAAACAAAAAGGTCAAGTTTTTAGGAGGTTGGGTGAACAGTCAAGCTCTGCAATAGTCGACTTTACATCAACCAAACCAAAAGGTCATGTGTTCCATCGACTAGGTGCCGCAAGCAAGATCACTAAACAGTGGCGCCGTCGATCAAGCCAAGCAGCTGCACCATTAGAGGGTGTCGAGTTTGAAAGAGATACTGAAAGCAAAGTTCCATCTCGAATGAAGCGCTTCTTGGCGGTAGAGGTGAATAATGGCGAAGTATTGAAGGCTAAGGGTCATATAATTGTCCATACCAAGAAACAAGGACCCTCACAGAACAATGAAGATGGTGAAGGTGAACATCATGTTTCTTCTTACCATATTTCCGTACAAGAAACTGCGGGGTCAAACCTCGACGATGAGGTGGAACCTAGTGAGGCACCCAAAACACTTGAAGACGGGGGGCAGGCTACAGTCGATGATTTAAAGGAATTAAACTTGGGCACTCAAGATGAGCCACACCCTATATATGTGAGTTCCTTACTTAGCCCTGAAGAGGAAGATGAGTACTTCAAGCTTCTTTTGAAGTATAAGGATGTTTTTGCATGGAGTTACAAAGAGATGCCCGGACTTGATCCCAGAATTGCAGTCCATCGATTGGCTATCAAGAAAGGTGTATCCCCAAAGAAGCAACCTCAGCGACGTTTTAGGCCAGAGTTGGTCCCTGAAATCGAATTTGAAGTCAACAAGCTTATTGAAGCCGACTTCATTCGCGAGGTCAAGTACCCTACATGGATTGCAAACGTTGTCCCTGCCAGAAAGAAAAATGGACTACTTCGTGTTTGTGTAGACTTTAGGGATCTAAATCAAGCATGCCCAAAGGATGATTTCCCGCTACCTGTGACAGAGCTTATGATAGATGCCACAACTGGACATGAAGCCCTCTCTTTCATGGATTGTACTGCTGGCTACAATCAAATTCACATGGCACCTGAGGATCAAGATGCCACGGCTTTTCGCACTCCAAAGGGGATCTTCTGCTACAAAGTGATGCCTTTCGGCCTGAAAAATGCAGGAGCGACTTATCAAAGGGCAATGCAGACTATCTTCGAGGACATGATGCATAAAACTATCGAGTGCTATGTAGATGATGTGGTGGTCAAGTCAAGAAAGCGAGAGGATCATCTCAAAAATCTTCAAGAAATTTTCAAAAGGCTGCGGAAACACCAATTGAAAATGAATCCACTCAAGTGTGCATTTGGTGTTACCTCAGGGAAGTTCTTAGGTTTCGTGGTAAGGCATAGAAGAATCGAGATCGACCAGTCCAAGATCAAAGCGATCCAGAATATGCCGCCTCCAAGGAATTTGAAGGAACTCCGAGGCCTCCAGGGTCGTCTAGCCTATATTCGACGATTCATCTCAAATCTCGCAGGGCGTTGCCATGCTTTCAGTCATCTTATGAAAAAGGGCGCCTCTTTTGAATGGGACGGTACTTGTGATGAGGCCTTCAAAAGCATAAAGAAGTATTTGTTGACCCCTCCAGTGCTTGGCGCGCCAATCTCAGGAAAGCCATTGATCCTCTACATTGCTGCACAAGAACGATCCTTAGGGGCATTATGTGCACAAGAGAATGAGGAGGAGAAATCAAAAGCGTGGAAACTCTGCTGCAGCGCCGACTCAAAGTCTCTCAAGTGCTTCTGCAACTCTCACGCATCCAAGTTCATCCAATCGAGAACAAGTCATACGACCCTCGACATCAAATTCACCACGAAGATCGAATCAGAGGACTTTTCTATTTTTCTTGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170180.p1 GENE.R_Transcript_170180~~R_Transcript_170180.p1 ORF type:complete len:1356 (+),score=266.81,RVT_1|PF00078.23|7.2e-26 R_Transcript_170180:5285-9352(+)
MLDDLLDKGVIELPLSKRPEEAGRTTDPNFCRYHRVVSHPIEKCITLKEKIMQLAKDGHILLDVDETVESNHAAAVFGPADSCQQLAEKELACPSHQVKQGCLIQFGTLEPVVVEIPSQLAKVQPVAAIQSIQKDDDDDEGWTLVTRRRPRRQPRPQPLPPRRRKQQGRKNNPRRSKGKKKAKISKRSEVLPIDLLEQEPPVPVTLGDYFPQDFFDVVTVNMVSCSEEGEEEEEKENDGEQISPEKSSYQLSPDAKVLAVLDALPSKMDWKQAFHLPGETRQQVALALNHPELYADKIGNPEEFVEATSKCVSCNTALAFTDEDLLLGSKPHNRPLFISGYIREQKVRRILVDGGSAVNIMPKSTMMECGIKMEELARSSTVIHGFNMGSQRAIGMIRVTLSMGDLSSAALFHVIDSKTSFKLLLGRPWLHENGIVASTLHQCLKYYRDGERKINGDVKPFTKAEAHFADAKFFEEMGTSETLPKMIPSTGKGRAMIEKSNPLPSKIIPVSCKAEGSQAKEGSTEEVQDPPTKKLGSTAPSSSPILRYIPKSHRKDGESPFKECSTQKWMPKELKKVDEASIQALKSQVIIPAAMTSLPPSSLPPLTEFIPSTTKLLKEEGKSSCGNATGNFDSKAYKLLARSGYDFSNPTPMGKVIEVKQYGLNDTQKKLQEQGGDVRASKLGLGYIPPKPIKIFARRKEVPSAIQHITAEEVSENDDEKDIHTQKVSVFDRLRPSLTKRTSVFNRIREHSSSMTKNAPSNKQKGQVFRRLGEQSSSAIVDFTSTKPKGHVFHRLGAASKITKQWRRRSSQAAAPLEGVEFERDTESKVPSRMKRFLAVEVNNGEVLKAKGHIIVHTKKQGPSQNNEDGEGEHHVSSYHISVQETAGSNLDDEVEPSEAPKTLEDGGQATVDDLKELNLGTQDEPHPIYVSSLLSPEEEDEYFKLLLKYKDVFAWSYKEMPGLDPRIAVHRLAIKKGVSPKKQPQRRFRPELVPEIEFEVNKLIEADFIREVKYPTWIANVVPARKKNGLLRVCVDFRDLNQACPKDDFPLPVTELMIDATTGHEALSFMDCTAGYNQIHMAPEDQDATAFRTPKGIFCYKVMPFGLKNAGATYQRAMQTIFEDMMHKTIECYVDDVVVKSRKREDHLKNLQEIFKRLRKHQLKMNPLKCAFGVTSGKFLGFVVRHRRIEIDQSKIKAIQNMPPPRNLKELRGLQGRLAYIRRFISNLAGRCHAFSHLMKKGASFEWDGTCDEAFKSIKKYLLTPPVLGAPISGKPLILYIAAQERSLGALCAQENEEEKSKAWKLCCSADSKSLKCFCNSHASKFIQSRTSHTTLDIKFTTKIESEDFSIFLV*

Click here to download the sequence:
Link to NCBI Protein BLAST