Transcript Information: R_Transcript_170186.p2


Annotated TAIR IDAT1G24090.1
Annotated Gene NameRNase H family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8520834-8522737 | Forward length=353
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20470610416507
Replicate 20.313963370711
Replicate 30.21408165977713
Condition 2: 8 Hour
Replicate 10.04576797186401
Replicate 20.12538812247394
Replicate 30.20356946490154
Condition 3: 24 Hour
Replicate 10.21455894605331
Replicate 20.12367434891913
Replicate 30.24546958527362


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170186.p2 GENE.R_Transcript_170186~~R_Transcript_170186.p2 ORF type:complete len:535 (-),score=87.90,RVT_3|PF13456.2|1.7e-18,rve|PF00665.22|1.6e-15 R_Transcript_170186:334-1938(-)
ATGGGTCTTCAAATGGCTCTTGAAATGGGGATTAAAGATCTCGACATCTATGGAGATTCGAAGTTGATAGTCAATCAACTCCTTGATGAGTATGAGGTAAAGAAAGATGACTTGGTTCCTTACCACAAGTATGCTTCTCAACTTTTGAACAAGTTCGACATTGTCAAATTAGAACACGTTCCAAGGAGTGCCAATAAGATGGCCGACGCTCTTGCAAATCTCGCAGCCACTTTGGCACTGGGGGCAAAGGAGAACGTGTATGTTCCAGTATGCAATCAATGGGTAGTAGCTCCTCTCAAAGATGATGTTGAAGAAGAAGTCAACGTGATCTCTGTTTATCAAGTTGACAAGGAAGATTGGCGTCAACCTCTCATTGACTACCTTGAGCATGGTAAGTTGCCAAATGATTCAAGGCATAGGACGGAAATTCGACGACGCGCCACTCGTTTTCTTTATTATAAAGGAACGCTCTATCGTCGATCTTTCCTCGGAATTTGGATGCGATGCCTTGGTGAAGAAGAAGCTGCGCAAGTGGTAGAAGAAGCTCACTCAGGGATATGTGGAGCTCATCAAGCTGGTCCAAAACTCTATGACCGAATCAAAAGAATGGGCTACTACTGGCCAACTATGGTGCAGGATTGTATAGACTTCGCAAAGAGATGTGATCCTTGCCAGTTTCATGCAAACTTCATCCACCAACCTCCCGAGCCGCTGCATCCCACAGTGTCATCATGGCCCTTTGAAGCATGGGGACTCGACATAGTTGGACCTCTCACGCCTAAGTCTTCTGCTGGACATGCATTTATTTTGGCTGCAACAGATTACTTCTCCAAATGGGCGGAGGCAATCCCACTTCGTGAAGTCAAGAAAGAAAATGTTGTCGACTTCATTCGAACCCATCTCATATATCGATATGGTACGCCACGATACATCATCACCGACAATGGCAAACAATTCGATAACAATTTGATGACTAGATTGTGTGAGAAATTCAAGTTTGCACAACACAAGTCCTCAATGTACAATGCTCCAGCAAATGGGTTGGCCGAAGCTTTCAACAAGACTCTATGCAATCTTCTAAAGAAAGTTGTTTCAAAGTCCAAGAGAGATTGGCATGAAAAGTTGGGAGAAACTTTGTGGGCATACCGCACCACTTTCAAAACTCCAACAAGATGTACTCCGTATTCCCTTGTGTATGGAGTAGAAGCTATTTTACCTCTAGAAATCGAGGTCCCATCTATGCGTGTTGCCATCCAAGAGAGTCTCACAGAAGATGAGAAGGACAAGCTCCGCCTTGCAGAATTAGAGGCACTAGATGAAAAGAGGCTTCAAGCACAACAAAGTTTACAATGTTATCAAGCTCGCCTATCTCGAGCATTCAACAAGAAAGTTCGGCCTCGCTCCTTCAAACAGGGAGATTTAGTCTTGGCGGTGAGAAGGCCAATAATCCCTTCAAAGAAACCTGGAAGCAAGTTCACTTCTAGGTGGGATGGTCCTTATGTTGTACAAGAAGTTTACACCAATGGTGCCTACAAGATTGTTGATGCAGAAGGACTACGAATTGGACCGATCAACGGCAAATTCTTGAAGCGCTACTATCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170186.p2 GENE.R_Transcript_170186~~R_Transcript_170186.p2 ORF type:complete len:535 (-),score=87.90,RVT_3|PF13456.2|1.7e-18,rve|PF00665.22|1.6e-15 R_Transcript_170186:334-1938(-)
MGLQMALEMGIKDLDIYGDSKLIVNQLLDEYEVKKDDLVPYHKYASQLLNKFDIVKLEHVPRSANKMADALANLAATLALGAKENVYVPVCNQWVVAPLKDDVEEEVNVISVYQVDKEDWRQPLIDYLEHGKLPNDSRHRTEIRRRATRFLYYKGTLYRRSFLGIWMRCLGEEEAAQVVEEAHSGICGAHQAGPKLYDRIKRMGYYWPTMVQDCIDFAKRCDPCQFHANFIHQPPEPLHPTVSSWPFEAWGLDIVGPLTPKSSAGHAFILAATDYFSKWAEAIPLREVKKENVVDFIRTHLIYRYGTPRYIITDNGKQFDNNLMTRLCEKFKFAQHKSSMYNAPANGLAEAFNKTLCNLLKKVVSKSKRDWHEKLGETLWAYRTTFKTPTRCTPYSLVYGVEAILPLEIEVPSMRVAIQESLTEDEKDKLRLAELEALDEKRLQAQQSLQCYQARLSRAFNKKVRPRSFKQGDLVLAVRRPIIPSKKPGSKFTSRWDGPYVVQEVYTNGAYKIVDAEGLRIGPINGKFLKRYYP*

Click here to download the sequence:
Link to NCBI Protein BLAST