Transcript Information: R_Transcript_170187.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.027335009064621
Condition 2: 8 Hour
Replicate 10.029219409244923
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.027395951345709
Replicate 20
Replicate 30.026118979339973


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170187.p1 GENE.R_Transcript_170187~~R_Transcript_170187.p1 ORF type:complete len:838 (-),score=149.48,RVT_1|PF00078.23|5.2e-27 R_Transcript_170187:4764-7277(-)
ATGCAAAAGTGGATGCCTAAGGATGTCAAGAAGGTGGATGAAGCAAGTATCCGAGCCTTGAAAAGCCAAGCAATCATCCCAGCTGCTATGACCAATCTACCCCCCTCAAACATGCCTCCACTCTCCGAATTTATCTCTTCCACTACAAAGTTGCTGAAGGAAGAAGGAAAATCAAGGAGCACAACGGGGAACTTTGACTCAAAGGCCTACAAGCTACTAGCAAGATCGGGATATGACTTCAATAACCCAACCCCTATGGGAAAAGTCATCGAAGTTAAGCAGTATGGCTTGAATGATACGCAAAAGAAACTCCAGGAACAAGGAGGGGATATTCGAGCATCAAAGTTAGGACTAGGATATATACCTCCTAAACCTGTAAGGATTTCTGCTCGGCGCAACGAAAGGTCATCTGCAACCCAATACATCACTGCTGAGGAAGTGCCAAAGAACGATGATGAGAATGACATCCACACTCAAAAGGTGTCCGTGTTTGATAGACTTCGTCCAAGCTTGACCAAAAGGACGTCGGTCTTCAACAGAATCGGTGAGCATTCAAGTTCCATGACAAAGAATGCTCCCTTAAATAAACAAAAAGGTCAAGTTTTTAGGAGGTTGGGTGAACAGTCAAGCTCTGCAATAGTCGACTTTACATCAACCAAACCAAAAGGTCATGTGTTCCATCGACTAGGTGCCGCAAGCAAGATCACTAAACAATGGCGTCGTCGATCAAGTCAAGCAACTGCATCATTAGACGGTGTCGAGTTTGAAAAGGATACCACAGAAAGCAAAGTGCCATCTCGAATGAAGCGCTTCTTGGCAGTAGAGGTAAAAAATGGTGAAGTGTTGAAGGCTAAGGGTCATATAATTGTTCACACCAAGCAACAAGGATCCTCACAAGACAATGAAGATGGGAAAGGTGAACATCATGTTCCTTCCTACCATATTTCCGTGCAGGAAACTCCAGAGTCAAACCTCGATAGTGAGGTGGAACCTAGTGAGGCACCCAAAACTCTTGAAGACGGGGGGCAGGCTACAGTCGATGACTTAAGGGAATTAAACTTGGGCACTCAAGATGAGCCACGCCCTATTTATGTGAGTTCCTTACTTAGCCCTGAAGAGGAAGATGAGTACTTCAAGCTTCTTTTGAAGTATAAGGATGTCTTTGCATGGAGCTACAAAGAGATGCCCGGACTTGATCCCAGAATTGCAGTCCATCGATTGGCTATCAAGAAAGGTGTATCCCCAAAGAAGCAACCTCAGCGACGTTTTAGGCCAGAGTTGGTCCCTGAAATCGAATCTGAAGTCAATAAGCTTATTGAAGCCGACTTCATTCGCGAGGTCAAGTACCCTACATGGATTGCAAACATTGTCCCTGTCAGAAAGAAAAATGGACAACTTCGTGTTTGTGTAGACTTTAGGGATCTAAATCAAGCATGCCCAAAGGATGATTTCCCGCTACCTGTGACAGAGCTTATGATAGATGCCACAACTGGACATGAAGCCCTCTCTTTCATGGATTGTACTGCTGGATACAATCAAATTCACATGGCGCCTGAGGATCAAGACGCTACAGCTTTTCGCACTCCAAAAGGGATTTTCTGCTACAAAGTGATGCCTTTTGGCTTGAAAAATGCAGGAGCTACTTATCAAAGGGCAATGCAGACCATTTTTGAGGACATGATGCATAAGACCATAGAGTGCTATGTAGATGATGTGGTGGTCAAGTCAAAAAGGCGAGAGGATCATCTCAAAAATCTTCAAGAAATTTTCGAAAGGCTGCGAAAACACCAATTGAAAATGAATCCACTCAAATGTGCATTTGGCGTTACATCAGGAAAGTTCTTAGGTTTCGTGGTAAGGCATAGAGGAATCGAGATCGACCAGTCCAAGATCAAAGCGATCCAGAATATGCCGCCTCCAAGGAATTTGAAGGAACTCCGAGGCCTCCAGGGTCGTCTAGCCTATATTCGACGATTCATCTCAAATCTCGCAGGGCGTTGCCATGCTTTCAGTCATCTTATGAAAAAGGGCGCCTCTTTTGAATGGGATGGTACTTGTGATGAGGCCTTCAAAAGCATAAAGAAGTATTTGTTGACCCCTCGAGTGCTTGGTGCGCCAATCTCAGGAAAGCCATTGATCCTCTACATTGCTGCACAAGAACGATCCTTAGGGGCATTATGTGCACAAGAGAATGAGGATGGGAAGGAAAGAGCGCTCTACTATCTGATTCGCACACTAGTTGGTGCCGAGTTGAACTATTCTCCAATAGAGAAGATGTGCCTAGCCCTCATCTTTGCTATTCAAAAGTTGAAGCACTACTTTCAAGCCCACACTGTCCATGTGATCTCCAAGGCTGGCCCGATCAAGTACATATTGTCGAGGCCAGTTTTATCAGGAAGACTTGCTAAGTGGGTCGTGCTCATTGAACAACATGACATTGTTTATGTCCCTCAAAAGGCTGTGAAAGGACAAGCATTGGCCGATTTCCTTGCAGATCACCCAATAGCTATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170187.p1 GENE.R_Transcript_170187~~R_Transcript_170187.p1 ORF type:complete len:838 (-),score=149.48,RVT_1|PF00078.23|5.2e-27 R_Transcript_170187:4764-7277(-)
MQKWMPKDVKKVDEASIRALKSQAIIPAAMTNLPPSNMPPLSEFISSTTKLLKEEGKSRSTTGNFDSKAYKLLARSGYDFNNPTPMGKVIEVKQYGLNDTQKKLQEQGGDIRASKLGLGYIPPKPVRISARRNERSSATQYITAEEVPKNDDENDIHTQKVSVFDRLRPSLTKRTSVFNRIGEHSSSMTKNAPLNKQKGQVFRRLGEQSSSAIVDFTSTKPKGHVFHRLGAASKITKQWRRRSSQATASLDGVEFEKDTTESKVPSRMKRFLAVEVKNGEVLKAKGHIIVHTKQQGSSQDNEDGKGEHHVPSYHISVQETPESNLDSEVEPSEAPKTLEDGGQATVDDLRELNLGTQDEPRPIYVSSLLSPEEEDEYFKLLLKYKDVFAWSYKEMPGLDPRIAVHRLAIKKGVSPKKQPQRRFRPELVPEIESEVNKLIEADFIREVKYPTWIANIVPVRKKNGQLRVCVDFRDLNQACPKDDFPLPVTELMIDATTGHEALSFMDCTAGYNQIHMAPEDQDATAFRTPKGIFCYKVMPFGLKNAGATYQRAMQTIFEDMMHKTIECYVDDVVVKSKRREDHLKNLQEIFERLRKHQLKMNPLKCAFGVTSGKFLGFVVRHRGIEIDQSKIKAIQNMPPPRNLKELRGLQGRLAYIRRFISNLAGRCHAFSHLMKKGASFEWDGTCDEAFKSIKKYLLTPRVLGAPISGKPLILYIAAQERSLGALCAQENEDGKERALYYLIRTLVGAELNYSPIEKMCLALIFAIQKLKHYFQAHTVHVISKAGPIKYILSRPVLSGRLAKWVVLIEQHDIVYVPQKAVKGQALADFLADHPIAI*

Click here to download the sequence:
Link to NCBI Protein BLAST