Transcript Information: R_Transcript_170214.p1


Annotated TAIR IDAT2G35030.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:14761080-14762963 | Reverse length=627
E-Value2E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10341620937518
Replicate 20
Replicate 30.12978321584222
Condition 2: 8 Hour
Replicate 10.41619033904666
Replicate 20.12669054867527
Replicate 30.25710496629443
Condition 3: 24 Hour
Replicate 10.32518140549156
Replicate 20.37487692165287
Replicate 30.55804346227217


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170214.p1 GENE.R_Transcript_170214~~R_Transcript_170214.p1 ORF type:complete len:353 (+),score=76.77,PPR|PF01535.16|6.3e-08,PPR|PF01535.16|0.00012,PPR|PF01535.16|3.5e-08,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.0015,PPR|PF01535.16|4.9e-06,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|13,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.044,PPR_2|PF13041.2|7e-05,PPR_2|PF13041.2|4.9e-05,PPR_2|PF13041.2|8.2e-08,PPR_2|PF13041.2|7.4e-06,PPR_2|PF13041.2|0.00019,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|5.8e-09,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|6.6e-06,PPR_2|PF13041.2|5.3,PPR_1|PF12854.3|0.00038,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|3.4e-05,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|5.7,PPR_1|PF12854.3|6.7e+03,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|9.4,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|0.64,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.0034,PPR_3|PF13812.2|0.8 R_Transcript_170214:408-1466(+)
ATGTCTACAAGAGATGTTACCTGGAATACCCTCATTACTGGGTACTGGCAAAATGGCTTCTTTGATGAATCTAGGAGACTTTTCAACTTGATGCCAGAAAGGAATGTCGTCTCTTGGAATTCCATGATCGCTGGGTGCATTGAAAATGACATGGTTGATCAAGGGTTTGAGTATTTTTGTATTATGCCCAACAGAAATGTGGCATCTTCAAATGCCATGATATCAGGTTTTGTCAAGTGTGGGAGGATAGAGGAGGCATCTCGTCTTTTTGAGGAAATGCCACGCAGGAATGTCGTCTCTTGCACTGCTATGATTGATGGGTTTCTTCAGAAAGGGATGGTTGAGAAGGCTAGGGCTTTGTTTGATCAGATTCCTTGCAAGAACAGTGTTACTTGGACTGTAATGATCAATGAGTATATCGAGAATGCAATGTTTGCGGAGGCTAAGGACTTGTTTCAACAGATGCCTTATAAAACCACCATTCCCACTACTGCTATGATCACTGGCTACTGTAACGAAGGCAAGATGGAGAAAGCCAGGGCTTTGTTTGATAAACTTGAGCAAAAGGACCTTGTTGCTTGGAATGCTATGATTACAGGTTATTTTCAAAATAGGGGTGGTGAGGAGGCCATGATGTTGCTTCCAGAAATGCTTAGGAGTGGTCTGCTACCCGATAAGACAACGATGGTTTCTATTCTGGCTGCCTGCTTGTCCCTGACATCCTTGAAAGAAGGCAGGCAAAATAATTCACTCATTGTTAAGTATGGGCTTGTGCTGTATGTATCAATTGGCAATGCCTTGGTTTCCATGTACGGCAAGTGTGGTGGTGTTTCTGATTCAGAGTTAGCTTTCAAAGAGATTCACAACCCAGACATTGTCTCATGGAACGCCCTTATTGCTGCTTTTGCAAAACATGGTCTCTATGGGAAAGTCCATACACTCTTCAACCAGATGGCTTCAACTGGTCTGTTGTATGCATGTGCTCATGCTGGTAAGGTGAATGAGAGTATGGCCTTATTTGACTCCATGGTCAACAGTTATAAAATCCCCCAGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170214.p1 GENE.R_Transcript_170214~~R_Transcript_170214.p1 ORF type:complete len:353 (+),score=76.77,PPR|PF01535.16|6.3e-08,PPR|PF01535.16|0.00012,PPR|PF01535.16|3.5e-08,PPR|PF01535.16|2.8e-05,PPR|PF01535.16|0.0015,PPR|PF01535.16|4.9e-06,PPR|PF01535.16|2.2e-06,PPR|PF01535.16|13,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|0.044,PPR_2|PF13041.2|7e-05,PPR_2|PF13041.2|4.9e-05,PPR_2|PF13041.2|8.2e-08,PPR_2|PF13041.2|7.4e-06,PPR_2|PF13041.2|0.00019,PPR_2|PF13041.2|0.00014,PPR_2|PF13041.2|5.8e-09,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|6.6e-06,PPR_2|PF13041.2|5.3,PPR_1|PF12854.3|0.00038,PPR_1|PF12854.3|0.6,PPR_1|PF12854.3|3.4e-05,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|0.00011,PPR_1|PF12854.3|5.7,PPR_1|PF12854.3|6.7e+03,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|9.4,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|12,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|0.64,PPR_3|PF13812.2|1.5,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.0034,PPR_3|PF13812.2|0.8 R_Transcript_170214:408-1466(+)
MSTRDVTWNTLITGYWQNGFFDESRRLFNLMPERNVVSWNSMIAGCIENDMVDQGFEYFCIMPNRNVASSNAMISGFVKCGRIEEASRLFEEMPRRNVVSCTAMIDGFLQKGMVEKARALFDQIPCKNSVTWTVMINEYIENAMFAEAKDLFQQMPYKTTIPTTAMITGYCNEGKMEKARALFDKLEQKDLVAWNAMITGYFQNRGGEEAMMLLPEMLRSGLLPDKTTMVSILAACLSLTSLKEGRQNNSLIVKYGLVLYVSIGNALVSMYGKCGGVSDSELAFKEIHNPDIVSWNALIAAFAKHGLYGKVHTLFNQMASTGLLYACAHAGKVNESMALFDSMVNSYKIPQV*

Click here to download the sequence:
Link to NCBI Protein BLAST