Transcript Information: R_Transcript_170217.p1


Annotated TAIR IDAT2G35030.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:14761080-14762963 | Reverse length=627
E-Value1E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41484002169815
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.11129938612384
Replicate 20
Replicate 30.16501464200352
Condition 3: 24 Hour
Replicate 10.20870733843367
Replicate 20.2005023535507
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170217.p1 GENE.R_Transcript_170217~~R_Transcript_170217.p1 ORF type:complete len:220 (+),score=43.23,PPR|PF01535.16|3.2e-08,PPR|PF01535.16|6e-05,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|0.00076,PPR|PF01535.16|1.4,PPR_2|PF13041.2|3.7e-05,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|4.2e-08,PPR_2|PF13041.2|3.9e-06,PPR_2|PF13041.2|4.5e-05,PPR_2|PF13041.2|6.2,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|1.8e-05,PPR_1|PF12854.3|5.5e-05,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|17,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|6,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|0.75,PPR_3|PF13812.2|3.4e+03 R_Transcript_170217:408-1067(+)
ATGTCTACAAGAGATGTTACCTGGAATACCCTCATTACTGGGTACTGGCAAAATGGCTTCTTTGATGAATCTAGGAGACTTTTCAACTTGATGCCAGAAAGGAATGTCGTCTCTTGGAATTCCATGATCGCTGGGTGCATTGAAAATGACATGGTTGATCAAGGGTTTGAGTATTTTTGTATTATGCCCAACAGAAATGTGGCATCTTCAAATGCCATGATATCAGGTTTTGTCAAGTGTGGGAGGATAGAGGAGGCATCTCGTCTTTTTGAGGAAATGCCACGCAGGAATGTCGTCTCTTGCACTGCTATGATTGATGGGTTTCTTCAGAAAGGGATGGTTGAGAAGGCTAGGGCTTTGTTTGATCAGATTCCTTGCAAGAACAGTGTTACTTGGACTGTAATGATCAATGAGTATATCGAGAATGCAATGTTTGCGGAGGCTAAGGACTTGTTTCAACAGATGCCTTATAAAACCACCATTCCCACTACTGCTATGATCACTGGCTACTGTAAAGAATGCAAGATGGAGATCATCGTATCGGAACTTTATGCTGAATACAATGACAATGTTCTTCAAACAGCTGAGTCTTATCTTCTTGACTTATACGACACTAACTTAACCATAGTGGTGTTTGAGTTTTACAGAGTGATTATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170217.p1 GENE.R_Transcript_170217~~R_Transcript_170217.p1 ORF type:complete len:220 (+),score=43.23,PPR|PF01535.16|3.2e-08,PPR|PF01535.16|6e-05,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|1.5e-05,PPR|PF01535.16|0.00076,PPR|PF01535.16|1.4,PPR_2|PF13041.2|3.7e-05,PPR_2|PF13041.2|2.5e-05,PPR_2|PF13041.2|4.2e-08,PPR_2|PF13041.2|3.9e-06,PPR_2|PF13041.2|4.5e-05,PPR_2|PF13041.2|6.2,PPR_1|PF12854.3|0.0002,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|1.8e-05,PPR_1|PF12854.3|5.5e-05,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|17,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|6,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|0.75,PPR_3|PF13812.2|3.4e+03 R_Transcript_170217:408-1067(+)
MSTRDVTWNTLITGYWQNGFFDESRRLFNLMPERNVVSWNSMIAGCIENDMVDQGFEYFCIMPNRNVASSNAMISGFVKCGRIEEASRLFEEMPRRNVVSCTAMIDGFLQKGMVEKARALFDQIPCKNSVTWTVMINEYIENAMFAEAKDLFQQMPYKTTIPTTAMITGYCKECKMEIIVSELYAEYNDNVLQTAESYLLDLYDTNLTIVVFEFYRVII*

Click here to download the sequence:
Link to NCBI Protein BLAST