Transcript Information: R_Transcript_170217.p3


Annotated TAIR IDAT2G36980.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:15531161-15533038 | Forward length=625
E-Value2E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.44915171757162
Condition 2: 8 Hour
Replicate 10.32007666597706
Replicate 20
Replicate 30.11863797791103
Condition 3: 24 Hour
Replicate 10.45015308289616
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170217.p3 GENE.R_Transcript_170217~~R_Transcript_170217.p3 ORF type:complete len:153 (+),score=27.03,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|5.7e+02,PPR_2|PF13041.2|7.8e-11,PPR_2|PF13041.2|0.025,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|4.2,PPR|PF01535.16|5.6e-07,PPR|PF01535.16|9e-05,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|1e-06,PPR_1|PF12854.3|0.0033,PPR_3|PF13812.2|8.9e+03,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|0.02 R_Transcript_170217:1202-1660(+)
ATGATGTTGCTTCCAGAAATGCTTAGGAGTGGTCTGCTACCCGATAAGACAACGATGGTTTCTATTCTGGCTGCCTGCTTGTCCCTGACATCCTTGAAAGAAGGCAGGCAAAATAATTCACTCATTGTTAAGTATGGGCTTGTGCTGTATGTATCAATTGGCAATGCCTTGGTTTCCATGTACGGCAAGTGTGGTGGTGTTTCTGATTCAGAGTTAGCTTTCAAAGAGATTCACAACCCAGACATTGTCTCATGGAACACCCTTGTTGCTGCTTTTGCAAGACATGGTCTCTATGGGAAAGCCCATACACTCTTCAACCAGATGGTTTCAACTGGCTTTGAGCCTTATGGGATAACTTTTCTTAGTCTGTTGTCTGCATGTGCTCATGCTGGTAAGGTGAATGAGAGTATGGCCTTATTTGACTCCATGGTCAACAGTTATAAAATCCCCCAGGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170217.p3 GENE.R_Transcript_170217~~R_Transcript_170217.p3 ORF type:complete len:153 (+),score=27.03,PPR_2|PF13041.2|1.7,PPR_2|PF13041.2|5.7e+02,PPR_2|PF13041.2|7.8e-11,PPR_2|PF13041.2|0.025,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|4.2,PPR|PF01535.16|5.6e-07,PPR|PF01535.16|9e-05,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|1e-06,PPR_1|PF12854.3|0.0033,PPR_3|PF13812.2|8.9e+03,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|4.3e+03,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|0.02 R_Transcript_170217:1202-1660(+)
MMLLPEMLRSGLLPDKTTMVSILAACLSLTSLKEGRQNNSLIVKYGLVLYVSIGNALVSMYGKCGGVSDSELAFKEIHNPDIVSWNTLVAAFARHGLYGKAHTLFNQMVSTGFEPYGITFLSLLSACAHAGKVNESMALFDSMVNSYKIPQV*

Click here to download the sequence:
Link to NCBI Protein BLAST