Transcript Information: R_Transcript_170220.p2


Annotated TAIR IDAT1G25360.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8894428-8896800 | Forward length=790
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21729715422284
Replicate 20.24995595733688
Replicate 30.27269925709705
Condition 2: 8 Hour
Replicate 10
Replicate 20.53240194859966
Replicate 30.43218120524731
Condition 3: 24 Hour
Replicate 10.27330722890124
Replicate 20
Replicate 32.084543303514


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170220.p2 GENE.R_Transcript_170220~~R_Transcript_170220.p2 ORF type:3prime_partial len:84 (+),score=15.48 R_Transcript_170220:299-547(+)
ATGTTATCAAATAGATATGCTGCATATGGGATGTGGAAGGAGGTTGCTAAGGTGAGATGCTTAATGAAAGAGCAGGGGGTTAAGAAGCAGAGTGCATATAGCTGGATAGATCTTGGTGACAAAGTGCGTGTTTTTGTAGGTGAGGGGACTTCTCTTCTGGAAATTGATAAAATATGTTTATTGTTAAAGCGGATTGGTTTGCACGTAAAGACTCTGAAGGATGATTCGGACTTTGTTTCGGAGCTGGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170220.p2 GENE.R_Transcript_170220~~R_Transcript_170220.p2 ORF type:3prime_partial len:84 (+),score=15.48 R_Transcript_170220:299-547(+)
MLSNRYAAYGMWKEVAKVRCLMKEQGVKKQSAYSWIDLGDKVRVFVGEGTSLLEIDKICLLLKRIGLHVKTLKDDSDFVSELA

Click here to download the sequence:
Link to NCBI Protein BLAST