Transcript Information: R_Transcript_17028.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value6E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.262245564452
Replicate 212.920800256183
Replicate 317.620567381656
Condition 2: 8 Hour
Replicate 111.929011128145
Replicate 218.806074984382
Replicate 323.922891945843
Condition 3: 24 Hour
Replicate 115.540669507984
Replicate 214.137986468319
Replicate 310.887730023739


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17028.p1 GENE.R_Transcript_17028~~R_Transcript_17028.p1 ORF type:5prime_partial len:195 (+),score=23.97,RVT_3|PF13456.2|1.1e-20 R_Transcript_17028:3-587(+)
CACGTTAAATTTCTTGTGTCTATTTTGTTCTCTTTTGGTTGTGATTGTTTTATTCTCGGTCTCCGATTCCGCTTCCGCACAACAAAGCATAAAGAGGAAATTCTACTCTCTTGGCAATCTCCGCAGCAGGGATGGATCAAGTTGAATACTGATGGTGCCTCGAAAGGGAATCCGGGTTTGGCTGGCGGGGGAGGAGTCTTTCGAGACTCGACTGGGCAATTCTTGGTGGGATTTGCAGCTGCTTTTGGTGTCTGCACAAGTCTGAGGGCTGAGCTCCTTGCAATACTCAAAGGTCTGACCATTGCTTGGGAGAAGGGTTATCGAGCTATAGAACCTGAGACTGACTCAGAGGCGTCAGTTAGGTTGCTGAAGGGGTCTGCTCCTCAGGCCTCGGCCTTATATCATCTAGTGATTAAGTGCAGAATGCTTATCAGGAAGGAGGGATGGAATGTGCGTGTGATACACTGTTATAGGGAAGTGAACCAAGTGGCTGACTATTTAGCAAATTTGGGCCTTCAACAATCTGCCAAGATGAAGCTGTTTGATGTACCTCCAGTACGTGGATGTGCGCCCCCTGCTGCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17028.p1 GENE.R_Transcript_17028~~R_Transcript_17028.p1 ORF type:5prime_partial len:195 (+),score=23.97,RVT_3|PF13456.2|1.1e-20 R_Transcript_17028:3-587(+)
HVKFLVSILFSFGCDCFILGLRFRFRTTKHKEEILLSWQSPQQGWIKLNTDGASKGNPGLAGGGGVFRDSTGQFLVGFAAAFGVCTSLRAELLAILKGLTIAWEKGYRAIEPETDSEASVRLLKGSAPQASALYHLVIKCRMLIRKEGWNVRVIHCYREVNQVADYLANLGLQQSAKMKLFDVPPVRGCAPPAA*

Click here to download the sequence:
Link to NCBI Protein BLAST