Transcript Information: R_Transcript_170345.p1


Annotated TAIR IDAT5G01980.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:375542-377023 | Forward length=493
E-Value1.5E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.624964660347
Replicate 212.94771859005
Replicate 311.262479318108
Condition 2: 8 Hour
Replicate 17.7538572332943
Replicate 28.9443527364742
Replicate 39.9833858412128
Condition 3: 24 Hour
Replicate 110.522328312698
Replicate 212.314186213906
Replicate 36.3839138670117


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170345.p1 GENE.R_Transcript_170345~~R_Transcript_170345.p1 ORF type:complete len:120 (+),score=8.08,zf-RING_2|PF13639.2|6.2e-12,zf-rbx1|PF12678.3|2.1e-09,zf-C3HC4_2|PF13923.2|5.9e-07,zf-ANAPC11|PF12861.3|2.7e-06,zf-C3HC4|PF00097.21|7.6e-07,zf-RING_11|PF17123.1|2.3e-06,zf-RING_5|PF14634.2|4.1e-06 R_Transcript_170345:67-426(+)
ATGGAGAAAATTAACTACTCATTTGATGGAGTTTTCGATCTTGATGAAGCTCTTACTATGCCATTACCATCTGTAAACGACGCCGTTTATAGCTGCTTAAGTATCCCAACATCGGAGTTGCAAGAGATTCCAATAACGACGACAATATTTCCAGCAGTTCCCACACCAAACGACGCCGTTTGCACCGTCTGCAGGGAGAGCTTTGACCCGCCACATCAGACAGGTAGGCAAATCCCTTGTGGACACGTGTACCATGCCCACTGTATTGCCACGTGGCTCTCCGTTGGTGATTCTTGCCCTCTTTGTAGACTTGCTGTCGTTGACCTTAACATTAAGGCATGTCATGAAAAAACTTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170345.p1 GENE.R_Transcript_170345~~R_Transcript_170345.p1 ORF type:complete len:120 (+),score=8.08,zf-RING_2|PF13639.2|6.2e-12,zf-rbx1|PF12678.3|2.1e-09,zf-C3HC4_2|PF13923.2|5.9e-07,zf-ANAPC11|PF12861.3|2.7e-06,zf-C3HC4|PF00097.21|7.6e-07,zf-RING_11|PF17123.1|2.3e-06,zf-RING_5|PF14634.2|4.1e-06 R_Transcript_170345:67-426(+)
MEKINYSFDGVFDLDEALTMPLPSVNDAVYSCLSIPTSELQEIPITTTIFPAVPTPNDAVCTVCRESFDPPHQTGRQIPCGHVYHAHCIATWLSVGDSCPLCRLAVVDLNIKACHEKTC*

Click here to download the sequence:
Link to NCBI Protein BLAST