Transcript Information: R_Transcript_17058.p1


Annotated TAIR IDAT3G51700.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19179443-19181145 | Reverse length=344
E-Value4E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3626416083719
Replicate 20.069524173563901
Replicate 30.45510074694343
Condition 2: 8 Hour
Replicate 10.24323706901237
Replicate 20.22212796530979
Replicate 30.24041868371374
Condition 3: 24 Hour
Replicate 10.22805768769242
Replicate 20.21909197573421
Replicate 30.28990337333639


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17058.p1 GENE.R_Transcript_17058~~R_Transcript_17058.p1 ORF type:complete len:302 (+),score=20.30,PIF1|PF05970.10|7.8e-34,Herpes_Helicase|PF02689.10|5.2e-07 R_Transcript_17058:53-907(+)
ATGCAAGCTAGGGAAGACCCAGAGTTCACTGCTTTTCTACTTAGACTCGGAAATGGGGAACTACAGAACTCTGAAGAAGCAAATATTGTTCTCCCCCACAACTTTTTCTCGGTACTTCCATCAAGTGGGAATTGTTTGGAGCATTTGGTGCAGTCAGTGTTTCCCGATATGGATCACCTTGCAGCTCATCCACATGCATTTACATCACGCGTAACGCTACCTCCAACAAATGATGAGGTCGACTGTATCAACCAGATGGTCATACACAAATTCCCCGGTAAAGCATATACCTACAAGAGCTACGACACAACTGTTGACGATGACTGCAATGCTCATCCTGTGGAATTCTTGAACACCCTATGCCCCGGAGGCATGAGCCCACACTATATGATGCTCAAAGTTAATTGTCCAGTAATATTACTTCGAAATCTTAACCCCTCGGTTGGTCTATGTAATGGCACAAAACTGATTTGTCGAGACTTCAAAGCAAATGTTATTATATGTGAAATAGCAACTGGGTATCGAGCTGGTGAACATGTTTTTATTCCAAGAATCAGCCTGAGGCCGTCGTCGTGTGTTAATTATCCCTACAAATTTGAGAGGCGGCAGTTTCCAATCAAACTATGCTTCGTAATGACGATAAACAAAGCTCAAGGCCAGACATTGACCGACGTTGCTGTTTACCTTGGAAAAAAGTGCTTCTCTCATGGACAGCTGTATGTTGCACTATCACGAGCAAAGAAGGCCAGTAGCATCAAGGTTTTTGTAGAGTCACTGAAACAACTTCAAACAGATTCGGTCTCTGTCACGAATATTGTTTCGTTTGATCTACTTCGGAGGGCCGGAATACGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17058.p1 GENE.R_Transcript_17058~~R_Transcript_17058.p1 ORF type:complete len:302 (+),score=20.30,PIF1|PF05970.10|7.8e-34,Herpes_Helicase|PF02689.10|5.2e-07 R_Transcript_17058:53-907(+)
MQAREDPEFTAFLLRLGNGELQNSEEANIVLPHNFFSVLPSSGNCLEHLVQSVFPDMDHLAAHPHAFTSRVTLPPTNDEVDCINQMVIHKFPGKAYTYKSYDTTVDDDCNAHPVEFLNTLCPGGMSPHYMMLKVNCPVILLRNLNPSVGLCNGTKLICRDFKANVIICEIATGYRAGEHVFIPRISLRPSSCVNYPYKFERRQFPIKLCFVMTINKAQGQTLTDVAVYLGKKCFSHGQLYVALSRAKKASSIKVFVESLKQLQTDSVSVTNIVSFDLLRRAGIR*

Click here to download the sequence:
Link to NCBI Protein BLAST