Transcript Information: R_Transcript_17061.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value3E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89166763284546
Replicate 20.4223393761899
Replicate 30.1974718758289
Condition 2: 8 Hour
Replicate 10.35180840441444
Replicate 20.83532029866498
Replicate 30.78239700949944
Condition 3: 24 Hour
Replicate 10.59373639381993
Replicate 20.57039462648045
Replicate 30.88053984372575


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17061.p1 GENE.R_Transcript_17061~~R_Transcript_17061.p1 ORF type:5prime_partial len:348 (+),score=38.56,PIF1|PF05970.10|2.3e-57 R_Transcript_17061:1-1044(+)
GTTGATCGCCTTCTACAAGATGTTTGCAGCTGTGAACTACCATTTGGTGGGAAAGTCGTCGTCTTTGGTGGTGATTTCAGACAGGTTTTGCCTGTGATTCCAAAGCGCACACAGCATGAGCTGGTCGAACATAGCCTTGTTAGCTCGTACCTGTGGCCAACATTTAAGAGATTCACACTTGCAGAAAATATGCGAGCTAGGGAAGACCCAGACTTCACTGCTTTTCTACTTAGACTCGGAAATGGGGAACTACAGAACTCTGAAGAAGCAAATATTGTTCTCCCCCACAACTTTTTCTCTGTACTTCCATTTACTGGGAATTGTTTGGACCATTTGGTACAGTCAGTGTTTCCCGATATGGATCACCTAGCAGCTCATTCACATGCATTTACATCACGTGCAACGTTAACTCCAACAAATGATGAGGTCGACTGTATCAACCAGATGGTCATACACAAATTCCCCGGTAAAGCATATACCTACAAGAGTTATGACACAACTGTCGACGATGACTGCAATGCTCATTCTGTGGAATTCTTGAACACCTTATGCCCAGGAGGCATGAGCCCACACTGTCTGATGCTCAAAGTTAACTGTCCAGTCATATTACTTCGAAATCTTAACCCCTCTGTTGGTCTATGTAATGGCACGAGATTGATTTGTCGAGACTTCAAAGCAAATGTTATTATATGTGAAATAGCAACTGGGTATCGAGCTGGTGAACATGTTTTTATTCCAAGAATCAGCCTTAGGCCGTCGTCGTCTATTACTTATCCCTACAAATTTGAGAGAAAGCAGTTCCCCATCAAACTATGCTTCGTAATGACGATAAACAAAGCTCAAGGCCAGACATTGACCGACGTTGCTGTTTACCTTGGAAAAAAGTGCTTCTCTCATGGACAGCTGTATGTTGCACTATCACGAGCAAAGAAGGCCAGTAGCATCAAGGTTTTTGTGGAGTCACGGAAACAACTTCAAACGGATTTGATCTCTGTCACGAATATTGTTTCGTTTGATCTACTTCGAAGGGCTGGAATACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17061.p1 GENE.R_Transcript_17061~~R_Transcript_17061.p1 ORF type:5prime_partial len:348 (+),score=38.56,PIF1|PF05970.10|2.3e-57 R_Transcript_17061:1-1044(+)
VDRLLQDVCSCELPFGGKVVVFGGDFRQVLPVIPKRTQHELVEHSLVSSYLWPTFKRFTLAENMRAREDPDFTAFLLRLGNGELQNSEEANIVLPHNFFSVLPFTGNCLDHLVQSVFPDMDHLAAHSHAFTSRATLTPTNDEVDCINQMVIHKFPGKAYTYKSYDTTVDDDCNAHSVEFLNTLCPGGMSPHCLMLKVNCPVILLRNLNPSVGLCNGTRLICRDFKANVIICEIATGYRAGEHVFIPRISLRPSSSITYPYKFERKQFPIKLCFVMTINKAQGQTLTDVAVYLGKKCFSHGQLYVALSRAKKASSIKVFVESRKQLQTDLISVTNIVSFDLLRRAGIQ*

Click here to download the sequence:
Link to NCBI Protein BLAST