Transcript Information: R_Transcript_170639.p1


Annotated TAIR IDAT1G12330.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 14; Plants - 217; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4194673-4196627 | Forward length=505
E-Value5.9E-152
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.630361561004
Replicate 20.7746207920576
Replicate 31.0674984510828
Condition 2: 8 Hour
Replicate 11.9018147531841
Replicate 21.0420605129873
Replicate 30.8459003007559
Condition 3: 24 Hour
Replicate 10.84698706276967
Replicate 20.42825745418597
Replicate 31.2750119235086


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170639.p1 GENE.R_Transcript_170639~~R_Transcript_170639.p1 ORF type:complete len:515 (+),score=44.45 R_Transcript_170639:297-1841(+)
ATGGCTCCTCCTTCTTCCTCTTCTCCTCTCCCTCCTCACCGCTCTCATCTCTTCACTCCTATACAGGAAGGGAACGAGAGCGAGGAAACAGAGGAACGGCACCGTTTTGGAGGATCAGCCACCGCAACCCCAAGCACCACCGACACCAACCACTACCAGCGAACCCCACTTCACGTGCCACCTGGAACCCGAAAGACCACCACCACTACCAACAACAATAAATCCCGCCGTTCCGATGCTGACGTGGAAAACGACCGAAGTGTCAACTGCACAAACTGCCGACCCACCCCACGTGAGAAAACCTCCGTTGTCGTCGTCCCTGTGGACCCCAAACACCACTCCCATTCCCACTTTCTCTCCTTCTCCTCCACTCCTGGCAGCACTCACGGCGGCGGTCTCTTCAAGTCCCTAATCTCCGGCATTTCACGGCGGAGCCCCAAACCCTCCCCACTTCCGGAATCCTCCTCATCGTCATCAATAACCGACAGAGAGGAGCAGTGGAGGATCGCCGTCGCCGAGCTGTCTCACAAACTCGTCCAAGCGAATCGCAGAAGAGACGAGGCCATTCTAGAATCTTCCAAATTGAAGTACTCAATGGCTGAGCTGGAGAAGAAGCTCAACCGTCTTGAGGTGTACTGTCACAGCCTCAAGTCCGGACTCGAAATTTGTGGTTACACCAAAACCAACCCTAACAACAGCCCTGCCCGGAATTCCATTCACTTTAAAGTTAACAACCATGACGTCATCATCAACAACTTCCTCGTCTCCGTCTCCGACGCCCGGTCCTCGATCCGCTACCTGAGCCGCTCGCTGACGTCACAGCTCAAGCTCATGGGGATTAAAGTCTTCGAGAGGTTATCCTCTGCTTTGCGTTCCTACGATATCAAAATATCATCTAATAATAATAATAATAATAATCAGAGGACCGTGCGGTTGTACTTGGAGGCATTGCTGAACTCGGCCTTCTTCGAGGACTTCGAGTCAGCCGGGTTCTCAAAAACCGGGGTGAACCGGATCCTGAACCCGGCTGAACGGTCCGAGGCCTACTATTCGGATTTCAATGCCCTCAAGGAGCTGGCGTGGGAGGAGGTTCTCGACAAAGGGACTAAGCATTTTAGTGAAGAGTTCAGCAGGTTTTGTGATCGTAAGATGAGTGAGATTGTCGCAATGCTTGGATGGAACAGGGCATGGCCTGAGCAGCTCTTGCAAGCCTTCTTTGGGGCTTCTAAGAGCGTTTGGTTGGTCCATCTCTTGGCCAATTCGGTTCACCCAAATTTGACCATATTCCGGGTTGGTAAAGGGGCTCGGTTCGACCCGGTTTATATGGAGGATATGGGTGGGGATAAGGCCAAGAAATTGCTCCCCACCGTGGTCCGGATCATGGTCACACCCGGGTTCTATGTCTATGACAATGTGGTCAAGTGCAAGGTCCTTTGCAGGTACTATAATACTAATAGTAGTAGTGGTAGTAGTAACTATAGTGTTTTTAGTAGTGGTACTAATGTTGAGGATCATATTAGGAGAAGTCCTTTGTCACTACCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170639.p1 GENE.R_Transcript_170639~~R_Transcript_170639.p1 ORF type:complete len:515 (+),score=44.45 R_Transcript_170639:297-1841(+)
MAPPSSSSPLPPHRSHLFTPIQEGNESEETEERHRFGGSATATPSTTDTNHYQRTPLHVPPGTRKTTTTTNNNKSRRSDADVENDRSVNCTNCRPTPREKTSVVVVPVDPKHHSHSHFLSFSSTPGSTHGGGLFKSLISGISRRSPKPSPLPESSSSSSITDREEQWRIAVAELSHKLVQANRRRDEAILESSKLKYSMAELEKKLNRLEVYCHSLKSGLEICGYTKTNPNNSPARNSIHFKVNNHDVIINNFLVSVSDARSSIRYLSRSLTSQLKLMGIKVFERLSSALRSYDIKISSNNNNNNNQRTVRLYLEALLNSAFFEDFESAGFSKTGVNRILNPAERSEAYYSDFNALKELAWEEVLDKGTKHFSEEFSRFCDRKMSEIVAMLGWNRAWPEQLLQAFFGASKSVWLVHLLANSVHPNLTIFRVGKGARFDPVYMEDMGGDKAKKLLPTVVRIMVTPGFYVYDNVVKCKVLCRYYNTNSSSGSSNYSVFSSGTNVEDHIRRSPLSLP*

Click here to download the sequence:
Link to NCBI Protein BLAST