Transcript Information: R_Transcript_17081.p1


Annotated TAIR IDAT3G57520.1
Annotated Gene Nameseed imbibition 2
Annotated Gene Symbol(s)AtSIP2, SIP2
Annotation TypeOrtholog
Chromosome Positionchr3:21288982-21292694 | Reverse length=773
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7878196423854
Replicate 26.5838201568893
Replicate 39.1445869454996
Condition 2: 8 Hour
Replicate 112.420366277588
Replicate 217.175749820041
Replicate 325.660972589822
Condition 3: 24 Hour
Replicate 117.815742367744
Replicate 213.250590321612
Replicate 319.897913351725


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17081.p1 GENE.R_Transcript_17081~~R_Transcript_17081.p1 ORF type:complete len:759 (+),score=154.85,Raffinose_syn|PF05691.8|0 R_Transcript_17081:248-2524(+)
ATGACCATCACACCAAACATTTACGTCAGCAATGGAGACCTTGTGGTTCATGGAAAGACCATATTGACAGGGGTGCCAGACAACATCATACTGACCCCAGGCGCTGTTGCTGGTCTTGCTGCTGGTGCATTTATTGGTGCCACAGCTGATCACAGCAAATGCCTCCATGTATTCCCCATGGGCACTCTAGAGGATCTTCGGTTCATGTGTTGTTTTCGCTTCAAGCTATGGTGGATGACTCAAAGGATGGGGAAATGCGGAAAAGATGTTCCGTTGGAAACTCAATTCTTAATTGTGGAGAGCAAGGATGGCACTGTAGAAGGTGAACCAGATGATGCTCCCACCATCTACACAGTATTTCTTCCCCTTTTGGAGGGCCAATTTCGTGCTGTTCTTCAAGGGAACGAGAAGAATGAAATAGAGATTTGCCTGGAGAGTGGGGACTCTGCTGTTGCGACCACCCAAGGGCTTCACCTTATTTACATGCATGCTGGGACCAACCCCTATGAAGTTATTAATCAGGCTGTAAAGGCTGTCGAAAAACATATGCAAACTTTTCGTCATCGAGAGAAGAAAAGATTGCCGGCTTTTGTTGATTGGTTTGGCTGGTGCACATGGGATGCTTTCTATACTGATGTCACGGCTGAGGGTGTTGACGATGGACTCAAAAGCTTGTCAGAGGGTGGGACTCCACCTCGGTTCTTGATTATTGATGATGGTTGGCAGCAGATAGGAAATGAGATTGTGAAGGATGACAATTGTGTAGTGCAAGAAGGGGCACAATTTGCCAACAGACTAACTGGAATCAAAGAGAATGGGAAGTTTCAAAAGAAAAAGAATGGCGAGGAGAGGGATCAGGTTCCAGGCCTGAAGCATGTTGTGGATGAGGCTAAACATCGTCGCAACGTGAAGAATGTATATGTGTGGCATGCTCTGGCTGGCTACTGGGGTGGAGTGAAACCAGCAGCCACGGGTATGGAACACTATGATTCGGCTCTGGCATACCCTGTTCAATCCCCTGGTGTATTGGGTAACCAACCAGATGTTGTCATGGACAGCCTCTCTGTTCATGGTCTTGGATTGGTTCATCCAAAGAAAGTCTTCGATTTCTACAATGAGCTTCACGCCTATCTTGCTTCATGTGGAGTAGACGGCGTCAAAGTTGATGTCCAGAATATAATCGAGACCCTTGGTGCTGGCCACGGTGGCAGAGTCTCCCTCACCCGTGCCTATCACCAGGCCCTTGAAGCTTCCATTGCCAGGAACTTCCCTGATAATGGCTGCATTTCCTGTATGTGCCACAACACCGATGGCATCTACAGCGCCAAGCAGACTGCTGTTGTTAGGGCTTCTGATGATTTCTATCCTCGTGATCCTGCTTCCCATACTATCCACATCTCTTCAGTTGCTTATAACTCCCTCTTCCTCGGCGAGTTCATGCTAGCTGACTGGGATATGTTCCATAGCTTGCATCCAGCTGCAGGTTACCATGCAGCAGCACGAGCAGTTGGTGGGTGTCCAATCTATGTGAGTGATAAGCTAGGTAATCACAACTTTGAGCTCTTGAAGAAGCTGGTCCTACCTGATGGTTCGGTGCTCCGTGCTCGTCTTCCTGGAAGGCCAACTCGCGACTGTCTTTTTAATGACCCAGCAAGAGATGGAACCAGCTTGCTTAAAATTTGGAACTTGAACAAGTGTTCTGGAGTCGTCGGTGTGTTCAACTGCCAAGGTGCCGGTTGGTGCAAGATTGAGAAGAAGACCCGCATACATGACACTTCTCCCGGAACCCTCACTGGGTCTGTTCTTGCCACTGACGTGGATTCCATTGCTGAAGTTGCTGGCCAGGACTGGAGTGGAGAAGTGGTTGTGTATTTGCAACGAGCAGGAGAGGTGATTCGGTTACCAAAAGGAGCTTCACTGCCTGTGACTCTCAAAGTTCTGGAATATGAGCTCTTTCATTTCTGCCCCATCAAGGAAACCAAAAACAACATTTCGTTGGCACCAATCGGCCTGCTAGATATGTTCAACAGTGGAGGGGCGGTGGACCAAATTGAGGTGCAGGAAACATCTGACCAAAAATCTGCAAGCGCCACCGTGCAGCTCAAAGTGAGAGGATGTGGCCGATTTGGAGCATACTCGTCACAAAGCCCTGTCAAATGTACAGTTGGAGGTGTCGAGACTGAATTCAACTATGACCTGGAGACCGGCCTCCTGACCTTCACTCTACCGGTAGCACAAGAGGAGTTTTACAGATGGCCAGTCGAGATCCACGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17081.p1 GENE.R_Transcript_17081~~R_Transcript_17081.p1 ORF type:complete len:759 (+),score=154.85,Raffinose_syn|PF05691.8|0 R_Transcript_17081:248-2524(+)
MTITPNIYVSNGDLVVHGKTILTGVPDNIILTPGAVAGLAAGAFIGATADHSKCLHVFPMGTLEDLRFMCCFRFKLWWMTQRMGKCGKDVPLETQFLIVESKDGTVEGEPDDAPTIYTVFLPLLEGQFRAVLQGNEKNEIEICLESGDSAVATTQGLHLIYMHAGTNPYEVINQAVKAVEKHMQTFRHREKKRLPAFVDWFGWCTWDAFYTDVTAEGVDDGLKSLSEGGTPPRFLIIDDGWQQIGNEIVKDDNCVVQEGAQFANRLTGIKENGKFQKKKNGEERDQVPGLKHVVDEAKHRRNVKNVYVWHALAGYWGGVKPAATGMEHYDSALAYPVQSPGVLGNQPDVVMDSLSVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRAYHQALEASIARNFPDNGCISCMCHNTDGIYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNSLFLGEFMLADWDMFHSLHPAAGYHAAARAVGGCPIYVSDKLGNHNFELLKKLVLPDGSVLRARLPGRPTRDCLFNDPARDGTSLLKIWNLNKCSGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVLATDVDSIAEVAGQDWSGEVVVYLQRAGEVIRLPKGASLPVTLKVLEYELFHFCPIKETKNNISLAPIGLLDMFNSGGAVDQIEVQETSDQKSASATVQLKVRGCGRFGAYSSQSPVKCTVGGVETEFNYDLETGLLTFTLPVAQEEFYRWPVEIHV*

Click here to download the sequence:
Link to NCBI Protein BLAST