Transcript Information: R_Transcript_17082.p2


Annotated TAIR IDAT3G57520.1
Annotated Gene Nameseed imbibition 2
Annotated Gene Symbol(s)AtSIP2, SIP2
Annotation TypeOrtholog
Chromosome Positionchr3:21288982-21292694 | Reverse length=773
E-Value1.3E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10929916739353
Replicate 20.12572634979819
Replicate 30.27433218678027
Condition 2: 8 Hour
Replicate 10
Replicate 20.26779499211001
Replicate 30.86953823331195
Condition 3: 24 Hour
Replicate 10.13747189956709
Replicate 20
Replicate 30.13106409992154


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_17082.p2 GENE.R_Transcript_17082~~R_Transcript_17082.p2 ORF type:complete len:167 (+),score=35.59,Raffinose_syn|PF05691.8|5e-54 R_Transcript_17082:129-629(+)
ATGACCATCACACCAAACATTTACGTCAGCAATGGAGACCTTGTGGTTCATGGAAAGACCATATTGACAGGGGTGCCAGACAACATCATACTGACCCCAGGCGCTGTTGCTGGTCTTGCTGCTGGTGCATTTATTGGTGCCACAGCTGATCACAGCAAATGCCTCCATGTATTCCCCATGGGCACTCTAGAGGATCTTCGGTTCATGTGTTGTTTTCGCTTCAAGCTATGGTGGATGACTCAAAGGATGGGGAAATGCGGAAAAGATGTTCCGTTGGAAACTCAATTCTTAATTGTGGAGAGCAAGGATGGCACTGTAGAAGGTGAACCAGATGATGCTCCCACCATCTACACAGTATTTCTTCCCCTTTTGGAGGGCCAATTTCGTGCTGTTCTTCAAGGGAACGAGAAGAATGAAATAGAGATTTGCCTGGAGAGTGGTGAGTTAATTTTCACCAGGAAACTGCATGGTCTTCCTTGCATCACTGGCCCCTTTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_17082.p2 GENE.R_Transcript_17082~~R_Transcript_17082.p2 ORF type:complete len:167 (+),score=35.59,Raffinose_syn|PF05691.8|5e-54 R_Transcript_17082:129-629(+)
MTITPNIYVSNGDLVVHGKTILTGVPDNIILTPGAVAGLAAGAFIGATADHSKCLHVFPMGTLEDLRFMCCFRFKLWWMTQRMGKCGKDVPLETQFLIVESKDGTVEGEPDDAPTIYTVFLPLLEGQFRAVLQGNEKNEIEICLESGELIFTRKLHGLPCITGPFL*

Click here to download the sequence:
Link to NCBI Protein BLAST