Transcript Information: R_Transcript_170850.p1


Annotated TAIR IDAT2G47850.1
Annotated Gene NameZinc finger C-x8-C-x5-C-x3-H type family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19595953-19598119 | Forward length=468
E-Value3E-192
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.054056095422
Replicate 28.326119130601
Replicate 310.614113325803
Condition 2: 8 Hour
Replicate 111.345821042366
Replicate 212.674379147051
Replicate 312.948670507216
Condition 3: 24 Hour
Replicate 114.694975747043
Replicate 211.170228101909
Replicate 317.925275390131


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_170850.p1 GENE.R_Transcript_170850~~R_Transcript_170850.p1 ORF type:complete len:464 (+),score=50.00,zf-CCCH|PF00642.20|2.2e-09,zf-CCCH|PF00642.20|1.7e-10,zf-CCCH|PF00642.20|3.1e-09,zf-CCCH|PF00642.20|1.2e-09,zf-CCCH|PF00642.20|1.9e-10 R_Transcript_170850:536-1927(+)
ATGGAGATGTACGGACGGAATTCGGGTAGAGAAGGGTCCGAACCCGATCCACCCTCTGACTGGCCCGTCGACACTGGCCTCGAAGAGTCCATGTGGAGGCTGGGCTTGGCGGGCCGGGAGACGTACCCGGAGAGGCCCGGGGTGTCGGATTGTATGTATTATATGAGGACTGGCTTCTGTGGCTTTGGTTCCCGCTGTCGGTACAACCATCCTCGTGATCGTGCTGCCGCTGTAGCAGCTGCAAGGTTGGCCGGAGGGGAGTACCCAGAACGTCCAGGAGAACCTGTATGTCAGTATTATTTAAAGACTGGAACTTGTAAATTTGGTTCTACTTGCAAGTTTCACCATCCGAGAAATGCTGGTGGATCATTGACCAATGCGCCACTAAATTATCACGGTTACCCATTACGACCGGGTGAGAAAGAATGCTCCTACTATTTGAAAACGGGGCAGTGCAAATTTGGGATAACTTGTAAATTCCATCATCCTCAACCAGCTGGCGTGTCGATGCCAGCAGCTGCGCCTCCATTTTATCCGACGGTGCAGTCTCCTTCTGTTCCTATTCCTGACCAAGCAGGGTCTTCCACCAACTATAGGGTGGCGAGGCCTCCTCTTGTACCTGGTTCTTATGTTCCTGGGAGTTATGGTCCTGTCCTTCTTTCTCCTGGAGTTGTTCCCATGCCAGGCTGGAGTTCATATTCGGGACCTGTAAGTCCTGTAATATCTCCGGGGGCTCAACCTGCTGGAGCAGGTTATGGAGTAAGTTCACTCTCCCCTTCTACACCTGGTCTAGCAGGGTCTTATCCCCATGTACCATCTTCTGCCCTGCAGTCAAGCTCTATTACCAAAGAACATAAGTTTCCAGAGAGACCAGGTGAACCTGAATGTCAATACTATATGAAAACAGGGAATTGTAAGTTTGGCTCCTCTTGTAGATATCATCATCCAGCGGACCGGGCTGCTTCAGCTGCATGTTTCCTTGGCCCACTAGGTCTGCCCCTTCGTCCGGGAACGCAACCTTGCACCTTCTATATGCAAAATGGGTATTGCAAATTTGGGCCCACATGTAAGTTCGACCATCCAGTGAGCATGATGAAATATAGTCCATCAGCTTCTTCTCTGACCGAGATGCCCATTGCTCCTTACTTTGCTGGGTCGTCAGTAGCTACTTTGCCCCCCTCATCTTCCTCTACGGAGCTTCGAACTGAATACGTGTTAGGGACACAAAGGGATGCCCAATCAAATAGAACACTGTCGTCTGGTAACACTTCTGTTGGTTTGACTTTCACACAAACAAGTCCCATTAATGGTCAACAGTCTGGTCAAGGTTCTACATTATTAAGCAGTAGCAGAAGCACGGGAGGAGATGATGAAGTTCATCACTCAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_170850.p1 GENE.R_Transcript_170850~~R_Transcript_170850.p1 ORF type:complete len:464 (+),score=50.00,zf-CCCH|PF00642.20|2.2e-09,zf-CCCH|PF00642.20|1.7e-10,zf-CCCH|PF00642.20|3.1e-09,zf-CCCH|PF00642.20|1.2e-09,zf-CCCH|PF00642.20|1.9e-10 R_Transcript_170850:536-1927(+)
MEMYGRNSGREGSEPDPPSDWPVDTGLEESMWRLGLAGRETYPERPGVSDCMYYMRTGFCGFGSRCRYNHPRDRAAAVAAARLAGGEYPERPGEPVCQYYLKTGTCKFGSTCKFHHPRNAGGSLTNAPLNYHGYPLRPGEKECSYYLKTGQCKFGITCKFHHPQPAGVSMPAAAPPFYPTVQSPSVPIPDQAGSSTNYRVARPPLVPGSYVPGSYGPVLLSPGVVPMPGWSSYSGPVSPVISPGAQPAGAGYGVSSLSPSTPGLAGSYPHVPSSALQSSSITKEHKFPERPGEPECQYYMKTGNCKFGSSCRYHHPADRAASAACFLGPLGLPLRPGTQPCTFYMQNGYCKFGPTCKFDHPVSMMKYSPSASSLTEMPIAPYFAGSSVATLPPSSSSTELRTEYVLGTQRDAQSNRTLSSGNTSVGLTFTQTSPINGQQSGQGSTLLSSSRSTGGDDEVHHSN*

Click here to download the sequence:
Link to NCBI Protein BLAST