Transcript Information: R_Transcript_171062.p1


Annotated TAIR IDAT3G48540.1
Annotated Gene NameCytidine/deoxycytidylate deaminase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17989798-17992015 | Reverse length=232
E-Value2.2E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3358859675865
Replicate 23.6924528318317
Replicate 32.8435950119362
Condition 2: 8 Hour
Replicate 12.1952844435461
Replicate 23.3926855207316
Replicate 33.3173633202776
Condition 3: 24 Hour
Replicate 13.4040886579009
Replicate 22.8899994408343
Replicate 33.6227924999003


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171062.p1 GENE.R_Transcript_171062~~R_Transcript_171062.p1 ORF type:5prime_partial len:290 (+),score=33.81,dCMP_cyt_deam_1|PF00383.18|7.3e-26 R_Transcript_171062:2-871(+)
TTGCAATTGCACCTCCATTCCATTTCTTCCTCTTTCTCTCTCTTCCTCTTGAAAATGAACTCAAGAGATTTAGGTCTGGTATCTTCTGCTACTTTGATTGGCGCCCTTACTTCTGCAATTTTTGTTCGTTTCTTCCTTAACAGCAACCCTAAGGAGCACCACCATCGTCAATCTTCAAGCAATCGAACCAAATTAAATGGAATCGTTCAAGATAAGACGGTCTCTCCTCGTAGTCCTTTTGATCCTTCCAAGCGTCTAGGGTACATCTCTTGGGACGATTATTTTATGGCTATTGCTTTTCTGTCCGCTCAGCGCTCCAAAGATCCTAACCGCCAGGTTGGTGCTTGCTTGGTTAGCCAAAACGGTGTAATTCTTGGCATCGGCTATAATGGATTCCCCCGAGGCTGTTCAGATGACAAACTTCCTTGGGCAAAGAAATCGAAGACTGGAGATTTTTTGGAAACAAAATATCCTTATGTCTGTCATGCTGAAGTAAATGCTATTCTCAACACGAACCATGCATCTGCTGCAGGACAGAAACTTTATGTTACCATGTTCCCTTGCAATGAGTGTGCCAAAATAATTATACAGTCAGGTGTTTCTGAAGTTATTTATTTCGTGGAGAAGAAGTTAGAGAATTCTGACAAATGCTACATTGCATCTCACAAGCTACTTTCAATGGCTGGCGTAAAGGCAAGTATTCCTTTCTCAATAGGCTGGTCTCGTCCATCCCTGGTTTCTGGCTACATCCTGTGCAAGCTGAGCTGCTTAATGCCACAAGCTGAGACTTCAGTAGCTGCACGTTCTACTCAATTTTCATCAGTCTTTAACCTTGTGTGTCTGCAGAACGTGGGCACATTACAAGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171062.p1 GENE.R_Transcript_171062~~R_Transcript_171062.p1 ORF type:5prime_partial len:290 (+),score=33.81,dCMP_cyt_deam_1|PF00383.18|7.3e-26 R_Transcript_171062:2-871(+)
LQLHLHSISSSFSLFLLKMNSRDLGLVSSATLIGALTSAIFVRFFLNSNPKEHHHRQSSSNRTKLNGIVQDKTVSPRSPFDPSKRLGYISWDDYFMAIAFLSAQRSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWAKKSKTGDFLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKKLENSDKCYIASHKLLSMAGVKASIPFSIGWSRPSLVSGYILCKLSCLMPQAETSVAARSTQFSSVFNLVCLQNVGTLQV*

Click here to download the sequence:
Link to NCBI Protein BLAST