Transcript Information: R_Transcript_171064.p1


Annotated TAIR IDAT3G48540.1
Annotated Gene NameCytidine/deoxycytidylate deaminase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17989798-17992015 | Reverse length=232
E-Value1.3E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8958888994261
Replicate 23.5685411774736
Replicate 34.2554018459256
Condition 2: 8 Hour
Replicate 11.9356414978059
Replicate 22.3863391688222
Replicate 30.93269145480249
Condition 3: 24 Hour
Replicate 12.8130119528017
Replicate 22.6152480897918
Replicate 33.3739940031186


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171064.p1 GENE.R_Transcript_171064~~R_Transcript_171064.p1 ORF type:5prime_partial len:253 (+),score=34.72,dCMP_cyt_deam_1|PF00383.18|5.3e-26 R_Transcript_171064:2-760(+)
TTGCAATTGCACCTCCATTCCATTTCTTCCTCTTTCTCTCTCTTCCTCTTGAAAATGAACTCAAGAGATTTAGGTCTGGTATCTTCTGCTACTTTGATTGGCGCCCTTACTTCTGCAATTTTTGTTCGTTTCTTCCTTAACAGCAACCCTAAGGAGGCGGCGGAGAACCACCATCGCCAATCTTCAAGCAATCGAACCAAATTAAATGGAATCGTTCAAGATAAGACGGTCTCTCCTCGTAGTCCTTTTGATCCTTCCAAGCGTCTAGGGTACATCTCTTGGGACGATTATTTTATGGCTATTGCTTTTCTATCGGCTCAGCGCTCCAAAGATCCTAATCGCCAGGTTGGTGCTTGCTTGGTTAGCCAAAACGGTGTAATTCTTGGCATCGGCTATAATGGATTCCCCCGAGGCTGTTCAGATGACAAACTTCCTTGGGCAAAGAAATCGAAGACTGGAGATTTTTTGGAAACAAAATATCCTTATGTCTGTCATGCTGAAGTAAATGCTATTCTCAACACGAACCATGCATCTGCTGCAGGACAGAAACTTTATGTTACCATGTTCCCTTGCAATGAGTGTGCCAAAATAATTATACAGTCAGGTGTTTCTGAAGTTATTTATTTCGTGGAGAAGAAGTTAGAGAATTCTGACAAATGCTACATTGCATCTCACAAGCTACTTTCAATGGCTGGCATAAAGGTCAGGAAGCATCAGCCTCAAATGGATCAGATCAACATAATATTTGAAGAGCCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171064.p1 GENE.R_Transcript_171064~~R_Transcript_171064.p1 ORF type:5prime_partial len:253 (+),score=34.72,dCMP_cyt_deam_1|PF00383.18|5.3e-26 R_Transcript_171064:2-760(+)
LQLHLHSISSSFSLFLLKMNSRDLGLVSSATLIGALTSAIFVRFFLNSNPKEAAENHHRQSSSNRTKLNGIVQDKTVSPRSPFDPSKRLGYISWDDYFMAIAFLSAQRSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWAKKSKTGDFLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKKLENSDKCYIASHKLLSMAGIKVRKHQPQMDQINIIFEEP*

Click here to download the sequence:
Link to NCBI Protein BLAST