Transcript Information: R_Transcript_171065.p1


Annotated TAIR IDAT3G48540.1
Annotated Gene NameCytidine/deoxycytidylate deaminase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17989798-17992015 | Reverse length=232
E-Value1.4E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41673426837257
Replicate 20
Replicate 30.20919395064979
Condition 2: 8 Hour
Replicate 10.33542280749651
Replicate 20
Replicate 30.41442033379879
Condition 3: 24 Hour
Replicate 10.6289810199371
Replicate 20.20141788941166
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171065.p1 GENE.R_Transcript_171065~~R_Transcript_171065.p1 ORF type:5prime_partial len:219 (+),score=26.15,dCMP_cyt_deam_1|PF00383.18|3.9e-23 R_Transcript_171065:2-658(+)
TTGCAATTGCACCTCCATTCCATTTCTTCCTCTTTCTCTCTCTTCCTCTTGAAAATGAACTCAAGAGATTTAGGTCTGGTATCTTCTGCTACTTTGATTGGCGCCCTTACTTCTGCAATTTTTGTTCGTTTCTTCCTTAACAGCAACCCTAAGGAGCACCACCATCGTCAATCTTCAAGCAATCGAACCAAATTAAATGGAATCGTTCAAGATAAGACGGTCTCTCCTCGTAGTCCTTTTGATCCTTCCAAGCGTCTAGGGTACATCTCTTGGGACGATTATTTTATGGCTATTGCTTTTCTGTCCGCTCAGCGCTCCAAAGATCCTAACCGCCAGGTTGGTGCTTGCTTGGTTAGCCAAAACGGTGTAATTCTTGGCATCGGCTATAATGGATTCCCCCGAGGCTGTTCAGATGACAAACTTCCTTGGGCAAAGAAATCGAAGACTGGAGATTTTTTGGAAACAAAATATCCTTATGTCTGTCATGCTGAAGTAAATGCTATTCTCAACACGAACCATGCATCTGCTGCAGGACAGAAACTTTATGTTACCATGTTCCCTTGCAATGAGTGTGCCAAAATAATTATACAGGTACTTCCATTGTTTTTCCATATGGTGTTCTCTGTGGAGTTGTGTGCATATGCAAGAAACACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171065.p1 GENE.R_Transcript_171065~~R_Transcript_171065.p1 ORF type:5prime_partial len:219 (+),score=26.15,dCMP_cyt_deam_1|PF00383.18|3.9e-23 R_Transcript_171065:2-658(+)
LQLHLHSISSSFSLFLLKMNSRDLGLVSSATLIGALTSAIFVRFFLNSNPKEHHHRQSSSNRTKLNGIVQDKTVSPRSPFDPSKRLGYISWDDYFMAIAFLSAQRSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWAKKSKTGDFLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQVLPLFFHMVFSVELCAYARNT*

Click here to download the sequence:
Link to NCBI Protein BLAST