Transcript Information: R_Transcript_171066.p1


Annotated TAIR IDAT3G48540.1
Annotated Gene NameCytidine/deoxycytidylate deaminase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17989798-17992015 | Reverse length=232
E-Value2E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0192008654919
Replicate 20.53290102579437
Replicate 30.46511142327213
Condition 2: 8 Hour
Replicate 10.37288119209003
Replicate 20.22701402884452
Replicate 30.55284093260062
Condition 3: 24 Hour
Replicate 10.93229674021133
Replicate 22.0152013199512
Replicate 30.77773569953442


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171066.p1 GENE.R_Transcript_171066~~R_Transcript_171066.p1 ORF type:5prime_partial len:197 (+),score=15.61,dCMP_cyt_deam_1|PF00383.18|1.7e-08 R_Transcript_171066:2-592(+)
TTGCAATTGCACCTCCATTCCATTTCTTCCTCTTTCTCTCTCTTCCTCTTGAAAATGAACTCAAGAGATTTAGGTCTGGTATCTTCTGCTACTTTGATTGGCGCCCTTACTGCGGCAATATTTGTTCGTTTCTTCCTTAACAACAACCCTAAGGAGCACCACCGATATCACCAATCTTCAAGCAATCGAACCAAATTAAATGGAATCGTTCAAGATAAGACGGTCTCTCCTCGTAGTCCTTTTGATCCTTCCAAGCGTCTAGGGTACATCTCTTGGGACGATTATTTTATGGCTATTGCTTTTCTGTCCGCTCAGCGCTCCAAAGATCCTAACCGCCAGGTTGGTGCTTGCTTGGTTAGCCAAAACGGTGTAATTCTTGGCATCGGCTATAATGGATTCCCCCGAGGCTGTTCAGATGACAAACTTCCTTGGGCAAAGAAATCGAAGACTGGAGATTTTTTGGAAACAAAATATCCGTGTGTTGTGTTCCTAGCTGTTTCCTTCACACCTTATTATCTTTTGGTCATTTTCAATTTATCATCATGTGTTTCTCTTTCTGAATTTTTCTTTCAGTTATGTCTGTCATGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171066.p1 GENE.R_Transcript_171066~~R_Transcript_171066.p1 ORF type:5prime_partial len:197 (+),score=15.61,dCMP_cyt_deam_1|PF00383.18|1.7e-08 R_Transcript_171066:2-592(+)
LQLHLHSISSSFSLFLLKMNSRDLGLVSSATLIGALTAAIFVRFFLNNNPKEHHRYHQSSSNRTKLNGIVQDKTVSPRSPFDPSKRLGYISWDDYFMAIAFLSAQRSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWAKKSKTGDFLETKYPCVVFLAVSFTPYYLLVIFNLSSCVSLSEFFFQLCLSC*

Click here to download the sequence:
Link to NCBI Protein BLAST