Transcript Information: R_Transcript_171240.p4


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98134198681284
Replicate 20
Replicate 30.49261801282048
Condition 2: 8 Hour
Replicate 10.78986661120146
Replicate 20.96175835876067
Replicate 30.97589304410683
Condition 3: 24 Hour
Replicate 10.49371628446675
Replicate 20.23715332140406
Replicate 30.47070332659994


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171240.p4 GENE.R_Transcript_171240~~R_Transcript_171240.p4 ORF type:3prime_partial len:93 (+),score=6.00,PIF1|PF05970.10|3e-21 R_Transcript_171240:3180-3455(+)
ATGCTGACTCCAACCAATGATGCGGTTGACTGCATAAACAAGCTAATGATAGCCAACTTCCTGGGTCAAGAACATAACTATAAGAGTTTTGACAACATTGTTGATGACGATTGCAATGCTCATCCGGTTGAGTTCCTCAATACTCTTTGCCCCGGAGGAATGAGCCCACATAATTTGACGTTGAAGCTCAATTGTCCAGTTATATTACTGTGTAATCTGAACCCAGCACTAGGCCTGTGCAATGGAACTCGACTGATTTGCAGAGGGTTTAAGCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171240.p4 GENE.R_Transcript_171240~~R_Transcript_171240.p4 ORF type:3prime_partial len:93 (+),score=6.00,PIF1|PF05970.10|3e-21 R_Transcript_171240:3180-3455(+)
MLTPTNDAVDCINKLMIANFLGQEHNYKSFDNIVDDDCNAHPVEFLNTLCPGGMSPHNLTLKLNCPVILLCNLNPALGLCNGTRLICRGFKP

Click here to download the sequence:
Link to NCBI Protein BLAST