Transcript Information: R_Transcript_171242.p2


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67751165115768
Replicate 20.22921725345304
Replicate 30.40011768726904
Condition 2: 8 Hour
Replicate 10.58808845943165
Replicate 20.14646865834838
Replicate 30.71338207678377
Condition 3: 24 Hour
Replicate 10.95239811643314
Replicate 20.72233380645996
Replicate 30.81242571981933


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171242.p2 GENE.R_Transcript_171242~~R_Transcript_171242.p2 ORF type:complete len:458 (+),score=59.22,Helitron_like_N|PF14214.2|4e-56 R_Transcript_171242:128-1501(+)
ATGAAAACCAGTGGTCTGAAAAGGTTGCAGCCAGTTAGTGACGTCGAAGGTGCATATGAGCAGGACACGACAGGTCCCTCTGAGAAGGTTGTGCAGGCACCACTCACTTCACAGGGTCGGGCGGTAAAGAGTCGGCGTGTTGTAGGATCATCACGACGTATTCATACAACCTACAATATGCTACCTCGAAGGCCAGCCGTGACTCCTTCTGCTCCTCGTACACAACCTTTGGCTCTGCCTTCTCCAACATATTGTAGTAAATGTTGTGCCAAGAAATTTGCTTTTGAAACAAAGCACTTCTGCTGTGACGATGGTAGAGTACGGTTAGCCCGCAATGATTGGCCACCAGAACTAATAAGACTGTATACTTCATTGGAAGAGGATGCTCTTCATTTCCAGAAATATGCTCGCATCTACAACAATCTTTTTGCTTTCAGTTCTATTGCGGGCGGTATAGATGCAAGTACCAAAAAAGTTGCAACAACCAATAGGGGGATCAGAAGAACAATGGTATCATGTAGAGAGTATTATACCTGCAAATTTCAAATTCGTGATGGTGACCATCTTTTGAGAACATGTAGGCTTCTTCAACAATTCTTGGTTGATGTATACGTCAAGATTGAGAATACAAGGCTAGATTTCTTTAGGCTGAATCAGAAACTCATTAGGGCTGAACTTTACCAGGGAATTTTGGACTGCCTAGAAATCGGAGAAAATAATGCCAACAATATTGGACGTAGAGTTGTTTTGCCTCCAACGTTCATTGGTGGACCTAGAGACATGAAACGGAGATACTTAAATGCAATGGCACTGGTCCAAAAATACGGCAAACCAGATATATTTCTGACAATGACATGCAATCCCAAATGGAAAGAGATTCAGGATGAGCTATCCCCTGGTGAAAAGGCCGAGAATATACCTGATTTGATAGCTCGAATCTTTCGGGCCAAGCTCATGGTGCTGAAGAAGAAAATTATTGACGAAGGGTTTTTTGGCCCAATCGCAGGCATGATCTATGTGGTTGAATTCCAGAAGCGAGGGCTTCCACATGTGCATTTCTTGCTTATTCTCGAACGTGGATTCAAAATTAAGTCACCAGAGCAATTTGACAAGTTTGTTTGCGCCGAGATTCTACCTGAAGATCAACCCTATTTGAGATCCTTGGTCCTAAAACATATGATGCATGGCCCATGTGGACCAATGTTTCCAGACTGCCCATGCATGCAAAAGAAAGGAAATGTCAAGAAATGTAGAAGCAAATACCCGAAAAAACATGTAGAGGTCACTACAAACAATTCTGATGGATACCCTTTGTATAGAAGAAGAAACAATGGTGACCGAGTTGAAGTTCGGAGGTTTGATATGGACAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171242.p2 GENE.R_Transcript_171242~~R_Transcript_171242.p2 ORF type:complete len:458 (+),score=59.22,Helitron_like_N|PF14214.2|4e-56 R_Transcript_171242:128-1501(+)
MKTSGLKRLQPVSDVEGAYEQDTTGPSEKVVQAPLTSQGRAVKSRRVVGSSRRIHTTYNMLPRRPAVTPSAPRTQPLALPSPTYCSKCCAKKFAFETKHFCCDDGRVRLARNDWPPELIRLYTSLEEDALHFQKYARIYNNLFAFSSIAGGIDASTKKVATTNRGIRRTMVSCREYYTCKFQIRDGDHLLRTCRLLQQFLVDVYVKIENTRLDFFRLNQKLIRAELYQGILDCLEIGENNANNIGRRVVLPPTFIGGPRDMKRRYLNAMALVQKYGKPDIFLTMTCNPKWKEIQDELSPGEKAENIPDLIARIFRAKLMVLKKKIIDEGFFGPIAGMIYVVEFQKRGLPHVHFLLILERGFKIKSPEQFDKFVCAEILPEDQPYLRSLVLKHMMHGPCGPMFPDCPCMQKKGNVKKCRSKYPKKHVEVTTNNSDGYPLYRRRNNGDRVEVRRFDMDN*

Click here to download the sequence:
Link to NCBI Protein BLAST