Transcript Information: R_Transcript_171244.p1


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1579855315924
Replicate 20.85329792332246
Replicate 31.2694620589001
Condition 2: 8 Hour
Replicate 11.3268202680773
Replicate 21.3218255275578
Replicate 32.168357426327
Condition 3: 24 Hour
Replicate 12.092213959175
Replicate 21.1679509018409
Replicate 31.832960491021


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171244.p1 GENE.R_Transcript_171244~~R_Transcript_171244.p1 ORF type:3prime_partial len:812 (+),score=137.10,PIF1|PF05970.10|6e-85,Helitron_like_N|PF14214.2|3.1e-34,Helitron_like_N|PF14214.2|2.4e+03,AAA_30|PF13604.2|1.2e-07 R_Transcript_171244:857-3289(+)
ATGGCCCTCGTCCAAAAGTATGGCAAGCCAGATATCTTCTTGACGATGACATGCAATCCAAAATGGAAGGAAATTCAAGACGAATTGAGCCCAGGTGAAAAAGTTGAGAATCGACCAGACTTAGTAGCTAGAATATTCCGGGCAAAATTAATGATCCTCAAGAAGAAAATAATGGAAGAAGAATTTTTTGGCCCTGTTGCAGCCATGATTTATGTTGTTGAGTTCCAGAAACGCGGACTTCCACATGTCCACTTTTTAATCATTTTGAAGGCTGGTTTTAAGATCAAATCACCCGAGCAATTTGATAAGTTTGTTTGTGCTGAGATACAACCCATTGAGAAGCCATATTTGAGATCATTGGTTCTGAAGCATATGATGCATGGTCCCTGTGGCCCAATGTTTCCTGAGTGTCCATGCATGCAAAAAAAAGGAACTACGCTGATGTGCCGAAGTAATTATCCTAAGAGGCATGTTGAGTTCACAACGAATAATTCCGATGGATACCCTTTGTATCGAAGAAGATGCAATGGTGATGCTGTGACGGTGAGAAAATTTGCTATGGAGAACCAATGGGTGATTCCTTATAATCCAGAACTGTTAGAGTTATTTGATTGTCACATCAATGTCGAGGTCTGTTCGACAATTACAGCAGTGAAGTACTTGTACAAGTACGTTTATAAAGGCCATGATAAAGTCTCATTTTCATTAGCTTCATCAGACAAACCAGTGGATGAAATTCAAGCATTCCAAGCAGGAAGATGGGTTTCACCACCTGAAGCAGCATGGCGTATTTTTGGATTTGATTTATATGAAATGTGGCCTTCTGTGCTGCCTTTACAAGTCCATTTGCCAAACAAGCAGAGTGTGTCTTTCAACCTTCATGAGCACGTGCCATCCATTGTTCGTAACAGCCAGAAATACGAAACACAGCTAACAGCTTTTTTTAGAATGAATGCTGCTCAAGCTGAGCGACCGAAGATGCGTTATTCAGAGTGTCCAGAACATTTTGTGTGGAACAAGAAGCAAAAGATATGGACACCAAGAATAGGAAAGCTACAAGTGGGAAGACTTGTATTTGTGAGTCCTGGTGAGGGGGAGCGCTACTTTTTGCGGTTGTTGCTCTGTCATGTTGAGGGGCCAACTTCTTTTGAAGATTTGTTAACCGTCGAGGATACAAAATGCCAGAGTTTCAAAGAAGCAGCTATGAAGAGGGGCCTTGTTGAAGCTGATGATGCCATTGACCAGTGTCTTAAAGAAGCAACTGAATTCCAAATGCCAGGTGCTCTTAGGCAGCTTTTTGCTACAACTTTATTGTTCTCCCAGCCTGCGGAACCACGCACACTGTGGAACAAATATTACTCTGATCTTTCAGAAGATTACAGACACTCGTACCCTCTAGACGAAAAAAAAGCAAGGCATCTAACTTGCCAAGACATTGAACGACTTTTGAAGCCTGCTGGCAAAACGTTTTTAGACTTTGATCTACCCGACCTCCACAAAATAGCAGAAGAATCAAACCTGCAGCGTTGCTCCATGGAAGTAATTGATGCTATCAATGCTCCTGTTCCAAAACACTTTGTAGGCCTTTGGAAGCAACTGAATCGTAAGCAAAAAGAGGCTTATAAAGCAATCATGGCATGTGTGAAGGAAAAGAAGCCGGGAGTATTCTTTATCGATGGCCCTGGTGGCACTGGGAAAACTTTCCTTTACTGTGCCATTTATGCAAAAGTGCGACTCATGGATAAGATTGTTTTGCCAACAGCGAGTTCAGGAATTGCTGCTTCAAATATTCCGAGTGGCCGAACTGCACACTCGCGGTTTAAAATTCCTTTAGATTCAGATGATTCGATGGTTTGCAATGTGCCCAAACAAAGTGACTTGGCACAGCTGCTAAGGGAGGCTGCATTAATAATTTGGGACGAAGCATCAATGGCAAGAAAGGAAAATGTTGAAGCTGTTGATCGGTTGTTGCGTGATATTTGCAGCTCTCCATTGCCATTTGGTGGCAAGGTGGTTGTGTTTGGTGGAGATTTCAGGCAGGTGCTCGCTGTGATACCAAAGCGAACACAACATGAACTTGTTGATCACAGCCTTGTGAGTTCATATCTATGGCCGACGTTTAGGAGATTTACACTTGCTGAGAACATGCGTGCAAAAGAAGATCCACATTTCACAGCTTTCTTACTAAGTCTAGGCAATGGTGATTTCCAAAAAGTCGAGCAAGCAGCTATTGAACTCCCACGATCCCTGGTGTCAAGGCTACGAGCAGATAACAATGCTTTACAGCATCTTGTGAATCTGGTGTACCCTGATCTTCCTCAGCTTGCAGCCCATCCGCATGCATTCAGCTCACGTGCAACACTAACTCCAACAAATGATGAGGTTGATTGCATTAATAAATTAGTGATTGACAATTTCCCGGGTGAACCATGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171244.p1 GENE.R_Transcript_171244~~R_Transcript_171244.p1 ORF type:3prime_partial len:812 (+),score=137.10,PIF1|PF05970.10|6e-85,Helitron_like_N|PF14214.2|3.1e-34,Helitron_like_N|PF14214.2|2.4e+03,AAA_30|PF13604.2|1.2e-07 R_Transcript_171244:857-3289(+)
MALVQKYGKPDIFLTMTCNPKWKEIQDELSPGEKVENRPDLVARIFRAKLMILKKKIMEEEFFGPVAAMIYVVEFQKRGLPHVHFLIILKAGFKIKSPEQFDKFVCAEIQPIEKPYLRSLVLKHMMHGPCGPMFPECPCMQKKGTTLMCRSNYPKRHVEFTTNNSDGYPLYRRRCNGDAVTVRKFAMENQWVIPYNPELLELFDCHINVEVCSTITAVKYLYKYVYKGHDKVSFSLASSDKPVDEIQAFQAGRWVSPPEAAWRIFGFDLYEMWPSVLPLQVHLPNKQSVSFNLHEHVPSIVRNSQKYETQLTAFFRMNAAQAERPKMRYSECPEHFVWNKKQKIWTPRIGKLQVGRLVFVSPGEGERYFLRLLLCHVEGPTSFEDLLTVEDTKCQSFKEAAMKRGLVEADDAIDQCLKEATEFQMPGALRQLFATTLLFSQPAEPRTLWNKYYSDLSEDYRHSYPLDEKKARHLTCQDIERLLKPAGKTFLDFDLPDLHKIAEESNLQRCSMEVIDAINAPVPKHFVGLWKQLNRKQKEAYKAIMACVKEKKPGVFFIDGPGGTGKTFLYCAIYAKVRLMDKIVLPTASSGIAASNIPSGRTAHSRFKIPLDSDDSMVCNVPKQSDLAQLLREAALIIWDEASMARKENVEAVDRLLRDICSSPLPFGGKVVVFGGDFRQVLAVIPKRTQHELVDHSLVSSYLWPTFRRFTLAENMRAKEDPHFTAFLLSLGNGDFQKVEQAAIELPRSLVSRLRADNNALQHLVNLVYPDLPQLAAHPHAFSSRATLTPTNDEVDCINKLVIDNFPGEPC

Click here to download the sequence:
Link to NCBI Protein BLAST