Transcript Information: R_Transcript_171377.p1


Annotated TAIR IDAT1G17520.1
Annotated Gene NameHomeodomain-like/winged-helix DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6024959-6027224 | Reverse length=296
E-Value3.7E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 152.523826420721
Replicate 233.636930258763
Replicate 345.735561118849
Condition 2: 8 Hour
Replicate 141.226201186688
Replicate 252.327505805223
Replicate 353.096548073241
Condition 3: 24 Hour
Replicate 152.553075728724
Replicate 241.259838060604
Replicate 350.550175110215


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171377.p1 GENE.R_Transcript_171377~~R_Transcript_171377.p1 ORF type:5prime_partial len:294 (+),score=71.17,Myb_DNA-binding|PF00249.27|3.4e-09,Linker_histone|PF00538.15|2.2e-07,Myb_DNA-bind_6|PF13921.2|2.6e-07 R_Transcript_171377:2-883(+)
TCATTGGTGCTTGCAGGGGGGCGCGAGAGAGAAAGAGGAAAGGAGGGAGAGATGGGGAACCCGAAGCAGAAGTGGACAGCAGAAGAAGAAGAAGCCCTAAGAGCAGGTGTAGCCAAATACGGTCCTGGCAAATGGAAATTCATTCAAAAAGATCCCGAATTCTTTCAATTCCTCAACAATCGCTCCAACATCGACCTCAAGGATAAATGGAGGAACATGAGTGCTGCAGGTCAAGGCTCTAGGGACAAGTTAAGGACTCCAAAGGCTAAGACCAACCAAGATGTCCCTGCTACTCCTGCAGTTAACATGCAAACCCCTGCTTCGGCTCCAATTGTTGCACATGAGCCACCAGCTGAACAGGTCAAGGAAGAGCCAGCTAAGGACTTACCTGATAACAAAAATGGCCCCAGGTACCATGACCTTATCCTTGAAGCCCTTTCAGCAACAAAAGAGCCAAATGGATTGGATATTACTTCAATCATCCATTATATCGAGAAAAGGGTTGAAGTGCCACCAACTTTTAGGAAAACGTTGACGGGAAAGTTGAGAAGACTTGTTAATCAGGAAAAACTCGAAAAGGTGGATAATGTGTATCGTATAAAGAACAATTCAACATTGGAGACAAATCCGATTATCCGAAAAGACAACTCCAGACAGCAATTGAGCACAGCCCAAATAAGGGCTGGTGAGTCACTAGAAGAAGCGGCAAAAACTGCAGCCTACAAGGTTGCCGAAGCAGAAAATACATCATTTATGGCTGCTGAGGCTGTTAAGGAAGCAGAGAGAGTCTCAAAGATGTTAGAACATACGGATTCCGTTCTGCAGCTGGCAAAAGAGATAGTTGAAAGATGTTCTCATGGTGAAATCACACTAGTTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171377.p1 GENE.R_Transcript_171377~~R_Transcript_171377.p1 ORF type:5prime_partial len:294 (+),score=71.17,Myb_DNA-binding|PF00249.27|3.4e-09,Linker_histone|PF00538.15|2.2e-07,Myb_DNA-bind_6|PF13921.2|2.6e-07 R_Transcript_171377:2-883(+)
SLVLAGGRERERGKEGEMGNPKQKWTAEEEEALRAGVAKYGPGKWKFIQKDPEFFQFLNNRSNIDLKDKWRNMSAAGQGSRDKLRTPKAKTNQDVPATPAVNMQTPASAPIVAHEPPAEQVKEEPAKDLPDNKNGPRYHDLILEALSATKEPNGLDITSIIHYIEKRVEVPPTFRKTLTGKLRRLVNQEKLEKVDNVYRIKNNSTLETNPIIRKDNSRQQLSTAQIRAGESLEEAAKTAAYKVAEAENTSFMAAEAVKEAERVSKMLEHTDSVLQLAKEIVERCSHGEITLVA*

Click here to download the sequence:
Link to NCBI Protein BLAST