Transcript Information: R_Transcript_171413.p1


Annotated TAIR IDAT3G07040.1
Annotated Gene NameNB-ARC domain-containing disease resistance protein
Annotated Gene Symbol(s)RPM1, RPS3
Annotation TypeHomolog
Chromosome Positionchr3:2226244-2229024 | Reverse length=926
E-Value4E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5225012368755
Replicate 22.5784930335805
Replicate 32.7863166198829
Condition 2: 8 Hour
Replicate 10.22910750827832
Replicate 20.86305157983523
Replicate 30.3184493091296
Condition 3: 24 Hour
Replicate 10.9666445148507
Replicate 20.41272999093478
Replicate 30.43519412827749


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171413.p1 GENE.R_Transcript_171413~~R_Transcript_171413.p1 ORF type:complete len:855 (+),score=151.07,NB-ARC|PF00931.18|6.1e-73,LRR_8|PF13855.2|5.1e+03,LRR_8|PF13855.2|4.1e-05,LRR_8|PF13855.2|1.2e+04,LRR_8|PF13855.2|1.4e+04,LRR_8|PF13855.2|5.6e+03,LRR_8|PF13855.2|0.042,LRR_8|PF13855.2|65,LRR_4|PF12799.3|1.5e+04,LRR_4|PF12799.3|9.2e+03,LRR_4|PF12799.3|0.00045,LRR_4|PF12799.3|2.2e+03,LRR_4|PF12799.3|2.2e+03,LRR_4|PF12799.3|1.6e+02,LRR_4|PF12799.3|1.1e+03,LRR_4|PF12799.3|2.1,LRR_4|PF12799.3|1.1e+02 R_Transcript_171413:216-2780(+)
ATGTTCGCTGTTTGTGAGATTCAATTGCTCAATTTCAAAGCCAATGCAATCAAAATCATCTTTTTAAGCATATGTTGCGCAGGTTTAATTGCATCGAAAATGAGCGCAGGTCTTATCTTAACGCCCATTTTGGGCGCAGCTTTCAGTCTCCACATCACTCCTGCTTTCTACGTAACTGAACAAGGTGGTGGAGATGAAAGACGAGGAGAACGTGCATGGAAAGATCCTAGGAAGAGTTTTTTGTATGCTGAAGACAGTGAACTTGTGGGAATTGAGAACCCAAGAAGTGAGATTTTTGGGTTGTTGAATTTGGAGGAAAATCAAAAGGAAAATTCAGTGATTTCAATGGTTGGCATGGGAGGTATAGGCAAAACCACACTTGCTCACAAGGTGTATGAAAATGTTGATGTTAAGCGTTACATCAACGTACGTGCATGGGTTACTGTATCTCCGTCTTATAATTGGAAAATTGTGCTTAGAAGTATGCTACAACAGTTCTATAAGACTGCTATGCAGGCTGCTCCCACTGATCTGGCCCAAATGGATGAAATTTCACTAATTGGTGAGCTAAGGAGCTTTTTACAGGACAAAAGGTACATGGTTGTATTTGATGATGTTTGGAATGTACAACTATGGAATGATGTGAAAAATGCTCTGCCTAACAACCATCTAGGCAGCAAGATATTGTTGACAACAAGACAAGAAACTGTAGCCTTTACTTGGAAAGGATCATCAAGTAACAATCATGTTTACAAGCTCAAACTCTTGCCTGAAGAGAAAGCATGGGAGCTGTTTTGCAAGAAGGCATTCCAAGGTGATTACAATGAGCAATGTCCCCAATGGCTAGAAGATATTTCACACAGTATTGCTGACAAGTGCAACGGCTTGCCACTCGCACTTGTCGCTGTTGGTGGTCTCTTATCTACTAAGGAGAAGGCTTTCTCCGAGTGGAAAAAGTTTCGTGACAGTCTTGGAAGTGAGCTTGAGCGTAACCCTCAACTGTCCAACATTACAAGAATTCTACTGCTGAGTTACAATGACTTGCCTCATTTCCTAAAGCCATGCTTACTGTACTTTGGTATGTTCCCTGAGGATTCTTCAATCAAGTATAATCGACTAGTCAAGCTATGGGTTGCTGAGGATTTTATCAGACGAAAGCGTGGCATAACAATGGAAGATGTTGCCAAAGAATATTTACATGAGCTTATCCAAAGGAGCTTAGTTCAAGTTTCTGTCTGGTATGACTCTGGAAGAGCCAGAGCATTTCGTGTCCATGACTTGTTGTATGAAGTACTTGTCATGAAATTGGAGAAGATGAAGTTCTGCCATGTTTTGGACAAGGATAATCTTCAAGTTCATTTACGAGGAAGGCGCTTATCGATCCAAGAAGGTCGTATAGATGATGCTTCTAGTAGCATTAAAGGTGAATGTAGTGTTCGATCAGTGTTTTTGTTCGGAGAAACACAAGAAAGTCCATCGATGTGGAGCTCAGTCTTGAAGAAGTTTTACCTTTTAAAAGTACTGGATCTTCAAGCTGCTTCTCTAAACAAAGTCCCTGAAGAGATTGGAGATCTCCTTCTCCTCCAATACTTAAGTTTGAGATCTACCAAGGTAAAGAGCATTCCAAGATCCATAGGGAAGCTTCGCAACCTCCAAACATTAGACCTCAAAAGATGCCCTGTGTGGGAGCTACCAGTTGAGATTGGCAACTTGAGAAATCTAAGACACTTTGTTGTGTATCAAAACACATGGCATGATACCTTGAAAGTTTGGGTAATAGGAGCAGTGACGATAGCTGATGGAGCCGTCTTGGGGGGATTGACGAGCCTACAAAAGCTCGCGGATGTAAATGTAGCAAAGAGTGTAGGGTTCATGGACCAATTAAGTTATTTCAAGGAGCTTAAATATTTGGCAATCTCAAATGTCAAAAGGGAAAATAGTATGGCATTATGCAAAGCCATAGAAGTGCTTAACAAACTAGAATCACTCAACATTACTATGGATTATGATAGTAATGAACCTCTTGATTTGCAACATATAACCTCTCCACCCTTACAACTTGAGCGTCTCTACTTGATCGGACCTTTGGAAAGTTTTCCTGATTGGATCAGTAAACTTGACCATTTGTACAAGTTGCGGTTTAGAGGATCGAAACTTAGAGAAATTCCATTGGAGAAGCTTCAAGATTTGCCTAATTTGACAATGCTTGGAATCAATAAAGATGTTTACAATGGTGAGCAACTCGTGTTCCAAGCTGGAGGGTTCAAGAAGCTCAAGGCCATGTACTTTGACCATTTGCTCAACTTGAAATCAGTTCAAGTACAACAAGGTGCTCTGCCTCTTCTTGAAGCTCTTTTGATTCATAGATCTCCACAGCTTAAGGAGGTGCCTCTTGGCTTTCAATACCTCAAGAGACTAACTTCCCTTGATATTGTTGAAATGCCTCAAGAATTTGTGGATGGCATAAGACCAAGTGGGTTGCTACATTATACAGTTGAGCATGTAGCTGATATTCGAGTTGGGTATCAAACTCCCACGGGAAAATACATTTATGAGAAACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171413.p1 GENE.R_Transcript_171413~~R_Transcript_171413.p1 ORF type:complete len:855 (+),score=151.07,NB-ARC|PF00931.18|6.1e-73,LRR_8|PF13855.2|5.1e+03,LRR_8|PF13855.2|4.1e-05,LRR_8|PF13855.2|1.2e+04,LRR_8|PF13855.2|1.4e+04,LRR_8|PF13855.2|5.6e+03,LRR_8|PF13855.2|0.042,LRR_8|PF13855.2|65,LRR_4|PF12799.3|1.5e+04,LRR_4|PF12799.3|9.2e+03,LRR_4|PF12799.3|0.00045,LRR_4|PF12799.3|2.2e+03,LRR_4|PF12799.3|2.2e+03,LRR_4|PF12799.3|1.6e+02,LRR_4|PF12799.3|1.1e+03,LRR_4|PF12799.3|2.1,LRR_4|PF12799.3|1.1e+02 R_Transcript_171413:216-2780(+)
MFAVCEIQLLNFKANAIKIIFLSICCAGLIASKMSAGLILTPILGAAFSLHITPAFYVTEQGGGDERRGERAWKDPRKSFLYAEDSELVGIENPRSEIFGLLNLEENQKENSVISMVGMGGIGKTTLAHKVYENVDVKRYINVRAWVTVSPSYNWKIVLRSMLQQFYKTAMQAAPTDLAQMDEISLIGELRSFLQDKRYMVVFDDVWNVQLWNDVKNALPNNHLGSKILLTTRQETVAFTWKGSSSNNHVYKLKLLPEEKAWELFCKKAFQGDYNEQCPQWLEDISHSIADKCNGLPLALVAVGGLLSTKEKAFSEWKKFRDSLGSELERNPQLSNITRILLLSYNDLPHFLKPCLLYFGMFPEDSSIKYNRLVKLWVAEDFIRRKRGITMEDVAKEYLHELIQRSLVQVSVWYDSGRARAFRVHDLLYEVLVMKLEKMKFCHVLDKDNLQVHLRGRRLSIQEGRIDDASSSIKGECSVRSVFLFGETQESPSMWSSVLKKFYLLKVLDLQAASLNKVPEEIGDLLLLQYLSLRSTKVKSIPRSIGKLRNLQTLDLKRCPVWELPVEIGNLRNLRHFVVYQNTWHDTLKVWVIGAVTIADGAVLGGLTSLQKLADVNVAKSVGFMDQLSYFKELKYLAISNVKRENSMALCKAIEVLNKLESLNITMDYDSNEPLDLQHITSPPLQLERLYLIGPLESFPDWISKLDHLYKLRFRGSKLREIPLEKLQDLPNLTMLGINKDVYNGEQLVFQAGGFKKLKAMYFDHLLNLKSVQVQQGALPLLEALLIHRSPQLKEVPLGFQYLKRLTSLDIVEMPQEFVDGIRPSGLLHYTVEHVADIRVGYQTPTGKYIYEKL*

Click here to download the sequence:
Link to NCBI Protein BLAST