Transcript Information: R_Transcript_171416.p1


Annotated TAIR IDAT3G07040.1
Annotated Gene NameNB-ARC domain-containing disease resistance protein
Annotated Gene Symbol(s)RPM1, RPS3
Annotation TypeOrtholog
Chromosome Positionchr3:2226244-2229024 | Reverse length=926
E-Value2.8E-147
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5002433661413
Replicate 20.70798905513334
Replicate 31.3034392309718
Condition 2: 8 Hour
Replicate 10.3096210530737
Replicate 20
Replicate 30.51643149288772
Condition 3: 24 Hour
Replicate 10.4112568207281
Replicate 20.44156998832557
Replicate 30.71498297712731


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171416.p1 GENE.R_Transcript_171416~~R_Transcript_171416.p1 ORF type:complete len:949 (+),score=180.06,NB-ARC|PF00931.18|2.5e-73,LRR_8|PF13855.2|5.7e+03,LRR_8|PF13855.2|4.6e-05,LRR_8|PF13855.2|6.6e+03,LRR_8|PF13855.2|0.047,LRR_8|PF13855.2|73,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|1.1e+04,LRR_4|PF12799.3|0.00051,LRR_4|PF12799.3|2.8e+03,LRR_4|PF12799.3|2.6e+03,LRR_4|PF12799.3|1.8e+02,LRR_4|PF12799.3|1.2e+03,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|1.2e+02 R_Transcript_171416:66-2912(+)
ATGGCAGAGGCACTTTTATCTATAGTCATAGATAAAGTTGTTGGTTTGATAACACCTTACATAACTGAAGAGATTCGGTTACAAAGCGGTGTTTCAAAAGAACTAGAATTCATTAAGAGTGAACTTGAGATAATTACAGCTTTCTTGAAAGATGCAGAGAATAAAGCAGAAGATGGAAATGATGCAGTCAAGGTATGGATTAACCAAGTTAGAAATGTTGCTTATCGACTCGAAGATGTGCTTGATGAACATATTATGTTCACATACATGCAAGATCATAGCCAACCAAGGAGTTCATGTTTGAGCATCCCATATACAGCTGTGCAATGCTTCAAGGACTTCAAGCCTAGGCACAAGATTGGGAGCTCCATTGCCGCAATAAAAGCTGAAATCCTTCAACTTCAACGACGAAAAGGGCTCTACGAGCTCCAGGTATCTGAACGAGGTGGTGCCCTTGAGAGTAGAAATGGTGGAGATCAAAGACGAGGAGCACGAGCATGGAAGGATCCTAGGATGAGTTTTTTGTATGCTGAAGACAGTGATCTCGTGGGAATTGAGAACCCAAGAAGCGAGATTTTTGGGTTGTTGAATTTGGAGGAAAATCAAAAGGAAAATTCAGTGATTTCAATGGTTGGCATGGGAGGTATAGGCAAAACCACACTTGCTCACAAGGTGTATGAAAATGTTGATGTTAAGCGTTACATCAACGTACGTGCATGGGTTAATGTATCTCCATCTTATAATTGGAAAACTGTGCTTAGAAGTATGCTACAACAGTTCTATAAGACTGCTATGCAGGCTGCTCCCACTGATCTGGCCCAAATGGATGAAATTTCACTAATTGGTGAGCTAAGGAGCTTTTTACAGGACAAAAGGTACATGGTTGTATTTGATGATGTTTGGAATGTACAACTATGGAATGATGTGAAAAATGCTCTGCCTAACAACCATCTAGGCAGCAAGATATTGTTGACAACAAGACAAGAAACTGTAGCCTTTACTTGGAAAGGATCATCAAGTAACAATCATGTTTACAAGCTCAAACTCTTGCCTGAAGAGAAAGCATGGGAGCTGTTTTGCAAGAAGGCATTCCAAGGTGATTACAATGAGCAATGTCCCCAATGGCTAGAAGATATTTCACACAGTATTGCTGACAAGTGCAACGGCTTGCCACTCGCACTTGTCGCTGTTGGTGGTCTCTTATCTACTAAGGAGAAGGCTTTCTCCGAGTGGAAAAAGTTTCGTGACAGTCTTGGAAGTGAGCTTGAGCGTAACCCTCAACTGTCCAACATTACAAGAATTCTACTGCTGAGTTACAATGACTTGCCTCATTTCCTAAAGCCATGCTTACTGTACTTTGGTATGTTCCCTGAGGATTCTTCAATCAAGTATAATCGACTAGTCAAGCTATGGGTTGCTGAGGATTTTATCAGACGAAAGCGTGGCATAACAATGGAAGATGTTGCCAAAGAATATTTACATGAGCTTATCCAAAGGAGCTTAGTTCAAGTTTCTGTCTGGTATGACTCTGGAAGAGCCAGAGCATTTCGTGTCCATGACTTGTTGTATGAAGTACTTGTCATGAAATTGGAGAAGATGAAGTTCTGCCATGTTTTGGACAAGGATAATCTTCAAGTTCATTTACGAGGAAGGCGCTTATCGATCCAAGAAGGTCGTATAGATGATGCTTCTAGTAGCATTAAAGGTGAATGTAGTGTTCGATCAGTGTTTTTGTTCGGAGAAACACAAGAAAGTCCATCGATGTGGAGCTCAGTCTTGAAGAAGTTTTACCTTTTAAAAGTACTGGATCTTCAAGCTGCTTCTCTAAACAAAGTCCCTGAAGAGATTGGAGATCTCCTTCTCCTCCAATACTTAAGTTTGAGATCTACCAAGGTAAAGAGCATTCCAAGATCCATAGGGAAGCTTCGCAACCTCCAAACATTAGACCTCAAAAGATGCCCTGTGTGGGAGCTACCAGTTGAGATTGGCAACTTGAGAAATCTAAGACACTTTGTTGTGTATCAAAACACATGGCATGATACCTTGAAAGTTTGGGTAATAGGAGCAGTGACGATAGCTGATGGAGCCGTCTTGGGGGGATTGACGAGCCTACAAAAGCTCGCGGATGTAAATGTAGCAAAGAGTGTAGGGTTCATGGACCAATTAAGTTATTTCAAGGAGCTTAAATATTTGGCAATCTCAAATGTCAAAAGGGAAAATAGTATGGCATTATGCAAAGCCATAGAAGTGCTTAACAAACTAGAATCACTCAACATTACTATGGATTATGATAGTAATGAACCTCTTGATTTGCAACATATAACCTCTCCACCCTTACAACTTGAGCGTCTCTACTTGATCGGACCTTTGGAAAGTTTTCCTGATTGGATCAGTAAACTTGACCATTTGTACAAGTTGCGGTTTAGAGGATCGAAACTTAGAGAAATTCCATTGGAGAAGCTTCAAGATTTGCCTAATTTGACAATGCTTGGAATCAATAAAGATGTTTACAATGGTGAGCAACTCGTGTTCCAAGCTGGAGGGTTCAAGAAGCTCAAGGCCATGTACTTTGACCATTTGCTCAACTTGAAATCAGTTCAAGTACAACAAGGTGCTCTGCCTCTTCTTGAAGCTCTTTTGATTCATAGATCTCCACAGCTTAAGGAGGTGCCTCTTGGCTTTCAATACCTCAAGAGACTAACTTCCCTTGATATTGTTGAAATGCCTCAAGAATTTGTGGATGGCATAAGACCAAGTGGGTTGCTACATTATACAGTTGAGCATGTAGCTGATATTCGAGTTGGGTATCAAACTCCCACGGGAAAATACATTTATGAGAAACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171416.p1 GENE.R_Transcript_171416~~R_Transcript_171416.p1 ORF type:complete len:949 (+),score=180.06,NB-ARC|PF00931.18|2.5e-73,LRR_8|PF13855.2|5.7e+03,LRR_8|PF13855.2|4.6e-05,LRR_8|PF13855.2|6.6e+03,LRR_8|PF13855.2|0.047,LRR_8|PF13855.2|73,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|1.1e+04,LRR_4|PF12799.3|0.00051,LRR_4|PF12799.3|2.8e+03,LRR_4|PF12799.3|2.6e+03,LRR_4|PF12799.3|1.8e+02,LRR_4|PF12799.3|1.2e+03,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|1.2e+02 R_Transcript_171416:66-2912(+)
MAEALLSIVIDKVVGLITPYITEEIRLQSGVSKELEFIKSELEIITAFLKDAENKAEDGNDAVKVWINQVRNVAYRLEDVLDEHIMFTYMQDHSQPRSSCLSIPYTAVQCFKDFKPRHKIGSSIAAIKAEILQLQRRKGLYELQVSERGGALESRNGGDQRRGARAWKDPRMSFLYAEDSDLVGIENPRSEIFGLLNLEENQKENSVISMVGMGGIGKTTLAHKVYENVDVKRYINVRAWVNVSPSYNWKTVLRSMLQQFYKTAMQAAPTDLAQMDEISLIGELRSFLQDKRYMVVFDDVWNVQLWNDVKNALPNNHLGSKILLTTRQETVAFTWKGSSSNNHVYKLKLLPEEKAWELFCKKAFQGDYNEQCPQWLEDISHSIADKCNGLPLALVAVGGLLSTKEKAFSEWKKFRDSLGSELERNPQLSNITRILLLSYNDLPHFLKPCLLYFGMFPEDSSIKYNRLVKLWVAEDFIRRKRGITMEDVAKEYLHELIQRSLVQVSVWYDSGRARAFRVHDLLYEVLVMKLEKMKFCHVLDKDNLQVHLRGRRLSIQEGRIDDASSSIKGECSVRSVFLFGETQESPSMWSSVLKKFYLLKVLDLQAASLNKVPEEIGDLLLLQYLSLRSTKVKSIPRSIGKLRNLQTLDLKRCPVWELPVEIGNLRNLRHFVVYQNTWHDTLKVWVIGAVTIADGAVLGGLTSLQKLADVNVAKSVGFMDQLSYFKELKYLAISNVKRENSMALCKAIEVLNKLESLNITMDYDSNEPLDLQHITSPPLQLERLYLIGPLESFPDWISKLDHLYKLRFRGSKLREIPLEKLQDLPNLTMLGINKDVYNGEQLVFQAGGFKKLKAMYFDHLLNLKSVQVQQGALPLLEALLIHRSPQLKEVPLGFQYLKRLTSLDIVEMPQEFVDGIRPSGLLHYTVEHVADIRVGYQTPTGKYIYEKL*

Click here to download the sequence:
Link to NCBI Protein BLAST