Transcript Information: R_Transcript_171482.p1


Annotated TAIR IDAT4G34530.1
Annotated Gene Namecryptochrome-interacting basic-helix-loop-helix 1
Annotated Gene Symbol(s)CIB1
Annotation TypeOrtholog
Chromosome Positionchr4:16498466-16499946 | Forward length=335
E-Value2E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3818611078393
Replicate 20.26355188807069
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 11.2487510207538
Replicate 20
Replicate 30.18316070867696


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171482.p1 GENE.R_Transcript_171482~~R_Transcript_171482.p1 ORF type:5prime_partial len:239 (+),score=51.00,HLH|PF00010.22|1.6e-08 R_Transcript_171482:3-719(+)
AACTTCACTGCAGACAATCCAGATTATTCTTCGTGGATTTCTACTACTATTGTTAATCTTGAGACTAGTAATAGCTCTCATGATCATGACCAGCAACAAAATCAAGCTGCAGCTAGTAATCATGAAAGGAAGATCAGAAAAAGCGTCTATCTTAAGACCAAGGAGAGGAGACAAAGAAAATGGAGGAATAAAGGCAGCATGATGGAAGATGATCAAGTTGAGGAGAACAAGATTAGTATTGGAGATATCAGTAATGAAAAAGGCGAGAAAAGAGCAAATGATCAAGAGAAGTCGGCTACTTGTGTGTATGTGAGAGCCAGGAGGGGGCAAGCCACAGATAGTCACAGCCTTGCTGAAAGGGTAAGAAGACAAAAAATCAGCGACAGGATGAAGCTGTTACAATCACTTGTTCCTGGCTGTGACAAGATAGCAGGGAAGGCCCTGATCCTGGATGAAATAATCAACTATGTCCAGTCCTTACAGAATCAAGTCGAGTTCCTAATGGCAAAGCTAGCTTCTCTTGACCTCACAAGCAGTGTCAATGGTGTTGCAGTAGACTTAATTGCAGCACAAGTAGAGAAATCATTTGCCGGAGGCAATTTTACATGCATACCAATGCCATCTCCACTATACACCATGTTTTCTGATGGGAATTGCTATGCAGTACCCATGTCAACTTGGATACCTCTTCTGCAAGATAAAGAAAATACAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171482.p1 GENE.R_Transcript_171482~~R_Transcript_171482.p1 ORF type:5prime_partial len:239 (+),score=51.00,HLH|PF00010.22|1.6e-08 R_Transcript_171482:3-719(+)
NFTADNPDYSSWISTTIVNLETSNSSHDHDQQQNQAAASNHERKIRKSVYLKTKERRQRKWRNKGSMMEDDQVEENKISIGDISNEKGEKRANDQEKSATCVYVRARRGQATDSHSLAERVRRQKISDRMKLLQSLVPGCDKIAGKALILDEIINYVQSLQNQVEFLMAKLASLDLTSSVNGVAVDLIAAQVEKSFAGGNFTCIPMPSPLYTMFSDGNCYAVPMSTWIPLLQDKENTI*

Click here to download the sequence:
Link to NCBI Protein BLAST