Transcript Information: R_Transcript_171484.p1


Annotated TAIR IDAT5G50915.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20710764-20712252 | Reverse length=286
E-Value3E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18437334297696
Replicate 20.14138922839258
Replicate 30.23138118783992
Condition 2: 8 Hour
Replicate 10.16488797944273
Replicate 20.15057832889687
Replicate 30.24446613630151
Condition 3: 24 Hour
Replicate 10
Replicate 20.29704052377882
Replicate 30.14739195075352


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_171484.p1 GENE.R_Transcript_171484~~R_Transcript_171484.p1 ORF type:complete len:297 (+),score=59.24,HLH|PF00010.22|2.2e-08 R_Transcript_171484:68-958(+)
ATGTCTGCAGCTTCTCATTTGTACCAGCAAGTGCAAGCAACTCCAATTGCATGCCTGTTTGAGGAATATGAACAGCTTCAGCATCAGGGGATTCCCCTTCCCCACCTTATTCCTCTTCATCAAACTCCTAATAATAATGAGTATCAGCATCAGTCCTGTAATGAATTATGTAATAACTTCAATGCAGACAATTCAGATCATTCTTCGTGGATTTCTACTGCTATTGGTAATCTCGAGACTAGTAACAGCTCTCATGATCATGACCTGCAATTCAATCAAGCTACAGCTAGTAATCATGAAAGGAAGATCAGGAAAAGAATCTACCTTAAGACCAAGGAGAGTAGACAAAGAAAATGGAGGAATAAAGACAGCATGATGGAAGATGATCAAATTGAGAAGAACAACGTTAATATTGGAGATATCAGTAATGAAAAAGGCGAGAAAAGAGCAAATGATCAAGAGAAGTCGGCTACTTGTGTGTATGTGAGAGCCAGGAGGGGGCAAGCCACAGATAGTCACAGCCTTGCTGAAAGGGTAAGAAGACAAAAAATCAGCGACAGGATGAAGCTGTTACAATCACTTGTTCCTGGCTGTGACAAGATAGCAGGGAAGGCCCTGATCCTGGATGAAATAATCAACTATGTCCAGTCCTTACAGAATCAAGTCGAGTTCCTAATGGCAAAGCTAGCTTCTCTTGACCTCACAAGCAGTGTCAATGGTGTTGCAGTAGACTTAATTGCAGCACAAGTAGAGAAATCATTTGCCGGAGGCAATTTTACATGCATACCAATGCCATCTCCACTATACACCATGTTTTCTGATGGGAATTGCTATGCAGTACCCATGTCAACTTGGATACCTCTTCTGCAAGATAAAGAAAATACAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_171484.p1 GENE.R_Transcript_171484~~R_Transcript_171484.p1 ORF type:complete len:297 (+),score=59.24,HLH|PF00010.22|2.2e-08 R_Transcript_171484:68-958(+)
MSAASHLYQQVQATPIACLFEEYEQLQHQGIPLPHLIPLHQTPNNNEYQHQSCNELCNNFNADNSDHSSWISTAIGNLETSNSSHDHDLQFNQATASNHERKIRKRIYLKTKESRQRKWRNKDSMMEDDQIEKNNVNIGDISNEKGEKRANDQEKSATCVYVRARRGQATDSHSLAERVRRQKISDRMKLLQSLVPGCDKIAGKALILDEIINYVQSLQNQVEFLMAKLASLDLTSSVNGVAVDLIAAQVEKSFAGGNFTCIPMPSPLYTMFSDGNCYAVPMSTWIPLLQDKENTI*

Click here to download the sequence:
Link to NCBI Protein BLAST